RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 GPD1LQ8N335 351 aa18.64■□□□□ 0.57
MMP9-201ENST00000372330 ANKFN1Q8N957 763 aa18.64■□□□□ 0.57
MMP9-201ENST00000372330 MCPH1Q8NEM0 835 aa18.64■□□□□ 0.57
MMP9-201ENST00000372330 USP13Q92995 863 aaPredicted RBP18.64■□□□□ 0.57
MMP9-201ENST00000372330 RCN3Q96D15 328 aa18.64■□□□□ 0.57
MMP9-201ENST00000372330 YTHDF1Q9BYJ9 559 aaKnown RBP18.64■□□□□ 0.57
MMP9-201ENST00000372330 POLR1BQ9H9Y6 1135 aa18.64■□□□□ 0.57
MMP9-201ENST00000372330 SLC9A2Q9UBY0 812 aa18.64■□□□□ 0.57
MMP9-201ENST00000372330 ATP11BQ9Y2G3 1177 aa18.64■□□□□ 0.57
MMP9-201ENST00000372330 SNX13Q9Y5W8 968 aa18.64■□□□□ 0.57
MMP9-201ENST00000372330 SRCAPQ6ZRS2 3230 aa18.64■□□□□ 0.57
MMP9-201ENST00000372330 MYH9P35579 1960 aaKnown RBP18.64■□□□□ 0.57
MMP9-201ENST00000372330 TCRBV5S1A1TA0A578 114 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 CLDN25C9JDP6 229 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 RGS20O76081 388 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 CFHP08603 1231 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 KDELR1P24390 212 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 PRAMEP78395 509 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 TRAP1Q12931 704 aaKnown RBP18.63■□□□□ 0.57
MMP9-201ENST00000372330 SF3B4Q15427 424 aaKnown RBP eCLIP18.63■□□□□ 0.57
MMP9-201ENST00000372330 SLC9B1Q4ZJI4 515 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 UNC5AQ6ZN44 842 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 CNTD1Q8N815 330 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 STON2Q8WXE9 905 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 FAM84AQ96KN4 292 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 PLAC1Q9HBJ0 212 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 PDLIM7Q9NR12 457 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.63■□□□□ 0.57
MMP9-201ENST00000372330 SLC15A5A6NIM6 579 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 GARTP22102 1010 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 HK2P52789 917 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 ROR1Q01973 937 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 SWSAP1Q6NVH7 229 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 ATG14Q6ZNE5 492 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 LINC00299Q6ZSB3 139 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 CAMK1DQ8IU85 385 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 REPS2Q8NFH8 660 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 NSUN6Q8TEA1 469 aaKnown RBP18.63■□□□□ 0.57
MMP9-201ENST00000372330 CIB1Q99828 191 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 HMG20AQ9NP66 347 aa18.63■□□□□ 0.57
MMP9-201ENST00000372330 NXF1Q9UBU9 619 aaKnown RBP18.63■□□□□ 0.57
MMP9-201ENST00000372330 CSPG5O95196 566 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 TOP3BO95985 862 aaKnown RBP18.62■□□□□ 0.57
MMP9-201ENST00000372330 PSAPP07602 524 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 BMP2P12643 396 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 ACO1P21399 889 aaKnown RBP18.62■□□□□ 0.57
MMP9-201ENST00000372330 TCEA1P23193 301 aaKnown RBP18.62■□□□□ 0.57
MMP9-201ENST00000372330 RPS12P25398 132 aaKnown RBP18.62■□□□□ 0.57
MMP9-201ENST00000372330 ARRB2P32121 409 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 NBPF12Q5TAG4 269 aaPredicted RBP18.62■□□□□ 0.57
MMP9-201ENST00000372330 VASH1Q7L8A9 365 aaPredicted RBP18.62■□□□□ 0.57
MMP9-201ENST00000372330 ZC3H7AQ8IWR0 971 aaKnown RBP18.62■□□□□ 0.57
MMP9-201ENST00000372330 RNF148Q8N7C7 305 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 SPATA18Q8TC71 538 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 CALML6Q8TD86 181 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 DEPDC1BQ8WUY9 529 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 GPN2Q9H9Y4 310 aaPredicted RBP18.62■□□□□ 0.57
MMP9-201ENST00000372330 JPH1Q9HDC5 661 aaPredicted RBP18.62■□□□□ 0.57
MMP9-201ENST00000372330 CD320Q9NPF0 282 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 RAB6BQ9NRW1 208 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 PAPSS1O43252 624 aaPredicted RBP18.62■□□□□ 0.57
MMP9-201ENST00000372330 MYO1DO94832 1006 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 FARP2O94887 1054 aaPredicted RBP18.62■□□□□ 0.57
MMP9-201ENST00000372330 MAGEA6P43360 314 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 OAZ1P54368 228 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 OGDHQ02218 1023 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 SLC10A2Q12908 348 aaPredicted RBP18.62■□□□□ 0.57
MMP9-201ENST00000372330 PTK2BQ14289 1009 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 MTX3Q5HYI7 312 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 DARS2Q6PI48 645 aaKnown RBP18.62■□□□□ 0.57
MMP9-201ENST00000372330 GADL1Q6ZQY3 521 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 C15orf39Q6ZRI6 1047 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 TTC30BQ8N4P2 665 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 TMCO5AQ8N6Q1 288 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 RAB2BQ8WUD1 216 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 WDR12Q9GZL7 423 aaKnown RBP18.62■□□□□ 0.57
MMP9-201ENST00000372330 ADAMTS10Q9H324 1103 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 SMARCAD1Q9H4L7 1026 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 NANOGQ9H9S0 305 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 MAGEE1Q9HCI5 957 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 VPS51Q9UID3 782 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 HACL1Q9UJ83 578 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 PSME2Q9UL46 239 aa18.62■□□□□ 0.57
MMP9-201ENST00000372330 ZNF214Q9UL59 606 aaPredicted RBP18.62■□□□□ 0.57
MMP9-201ENST00000372330 CENPBD1B2RD01 187 aa18.61■□□□□ 0.57
MMP9-201ENST00000372330 RGS13O14921 159 aa18.61■□□□□ 0.57
MMP9-201ENST00000372330 GMNNO75496 209 aa18.61■□□□□ 0.57
MMP9-201ENST00000372330 HSPA4LO95757 839 aa18.61■□□□□ 0.57
MMP9-201ENST00000372330 TUBA3CQ13748 450 aa18.61■□□□□ 0.57
MMP9-201ENST00000372330 E2F2Q14209 437 aa18.61■□□□□ 0.57
MMP9-201ENST00000372330 TIGD2Q4W5G0 525 aa18.61■□□□□ 0.57
MMP9-201ENST00000372330 PRAMEF18Q5VWM3 479 aa18.61■□□□□ 0.57
MMP9-201ENST00000372330 HERC6Q8IVU3 1022 aa18.61■□□□□ 0.57
MMP9-201ENST00000372330 CCDC60Q8IWA6 550 aaPredicted RBP18.61■□□□□ 0.57
MMP9-201ENST00000372330 ZNF280CQ8ND82 737 aa18.61■□□□□ 0.57
MMP9-201ENST00000372330 MCUQ8NE86 351 aa18.61■□□□□ 0.57
MMP9-201ENST00000372330 PBXIP1Q96AQ6 731 aa18.61■□□□□ 0.57
MMP9-201ENST00000372330 OR52B2Q96RD2 323 aa18.61■□□□□ 0.57
MMP9-201ENST00000372330 FAM213AQ9BRX8 229 aa18.61■□□□□ 0.57
MMP9-201ENST00000372330 RMND5AQ9H871 391 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms