RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 FBXO39Q8N4B4 442 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 ARHGEF6Q15052 776 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 TAF13Q15543 124 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 IL17REQ8NFR9 667 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 MAFIPQ8WZ33 124 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 GAL3ST3Q96A11 431 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 TP53INP1Q96A56 240 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 TMED5Q9Y3A6 229 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 GRIN2AQ12879 1464 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 PPP1R3GB7ZBB8 358 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 MYBP10242 640 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 VCLP18206 1134 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 HERC3Q15034 1050 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 TSGA10IPQ3SY00 556 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 AGAP1Q9UPQ3 857 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 MAP2K7O14733 419 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 SP100P23497 879 aaPredicted RBP15.49■□□□□ 0.07
COL5A1-201ENST00000371817 GALNT3Q14435 633 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 INO80EQ8NBZ0 244 aaPredicted RBP15.49■□□□□ 0.07
COL5A1-201ENST00000371817 MED8Q96G25 268 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 HGH1Q9BTY7 390 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 LNPEPQ9UIQ6 1025 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 MYMKA6NI61 221 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 SEC22BO75396 215 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 SLC25A3Q00325 362 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 BLMHQ13867 455 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 TTMPQ5BVD1 217 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 PRDM8Q9NQV8 689 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 CORO2BQ9UQ03 480 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 RPH3AQ9Y2J0 694 aaPredicted RBP15.49■□□□□ 0.07
COL5A1-201ENST00000371817 LMTK3Q96Q04 1460 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 OR5F1O95221 314 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 SQLEQ14534 574 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 SPANXN3Q5MJ09 141 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 CCDC28AQ8IWP9 274 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 SERAC1Q96JX3 654 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 PRPF19Q9UMS4 504 aaKnown RBP15.49■□□□□ 0.07
COL5A1-201ENST00000371817 MTF2Q9Y483 593 aaPredicted RBP15.49■□□□□ 0.07
COL5A1-201ENST00000371817 AFF2P51816 1311 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 DDX3XO00571 662 aaKnown RBP eCLIP15.49■□□□□ 0.07
COL5A1-201ENST00000371817 AP1S1P61966 158 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 C10orf107Q8IVU9 208 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 PQLC1Q8N2U9 271 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 DIRAS2Q96HU8 199 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 KATNAL1Q9BW62 490 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 PRDM5Q9NQX1 630 aaPredicted RBP15.49■□□□□ 0.07
COL5A1-201ENST00000371817 AASSQ9UDR5 926 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 COG5Q9UP83 839 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 NR2F6P10588 404 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 GNA13Q14344 377 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 GOLGA7BQ2TAP0 167 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 NSUN6Q8TEA1 469 aaKnown RBP15.48■□□□□ 0.07
COL5A1-201ENST00000371817 PLEKHF1Q96S99 279 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 DPP3Q9NY33 737 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 CLEC4AQ9UMR7 237 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 AP4E1Q9UPM8 1137 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 HOXB6P17509 224 aaKnown RBP15.48■□□□□ 0.07
COL5A1-201ENST00000371817 PTGES3Q15185 160 aaKnown RBP15.48■□□□□ 0.07
COL5A1-201ENST00000371817 SUPT20HL1Q3ZLR7 823 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 ZNF549Q6P9A3 640 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 FAM20CQ8IXL6 584 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 CDYL2Q8N8U2 506 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 OR56A4Q8NGH8 313 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 TRDMT1O14717 391 aaKnown RBP15.48■□□□□ 0.07
COL5A1-201ENST00000371817 LGR5O75473 907 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 ARHGAP15Q53QZ3 475 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 NOL11Q9H8H0 719 aaKnown RBP15.48■□□□□ 0.07
COL5A1-201ENST00000371817 PDGFCQ9NRA1 345 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 EIF3KQ9UBQ5 218 aaKnown RBP15.48■□□□□ 0.07
COL5A1-201ENST00000371817 TDRKHQ9Y2W6 561 aaKnown RBP15.48■□□□□ 0.07
COL5A1-201ENST00000371817 PCDHA10Q9Y5I2 948 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 GARTP22102 1010 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 HARS2P49590 506 aaKnown RBP15.48■□□□□ 0.07
COL5A1-201ENST00000371817 RPL14P50914 215 aaKnown RBP15.48■□□□□ 0.07
COL5A1-201ENST00000371817 PTPN5P54829 565 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 BMPR2Q13873 1038 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 STRIP1Q5VSL9 837 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 MKLN1Q9UL63 735 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 PDLIM1O00151 329 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 OR6A2O95222 327 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 PSME3P61289 254 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 CLCC1Q96S66 551 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 SCUBE2Q9NQ36 999 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 GIT1Q9Y2X7 761 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 STMND1H3BQB6 276 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 COX4I1P13073 169 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 RPL21P46778 160 aaKnown RBP15.48■□□□□ 0.07
COL5A1-201ENST00000371817 E2F2Q14209 437 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 FAAH2Q6GMR7 532 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 KCNMB4Q86W47 210 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 EHD4Q9H223 541 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 TRIT1Q9H3H1 467 aaKnown RBP15.48■□□□□ 0.07
COL5A1-201ENST00000371817 RASSF1Q9NS23 344 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 STK32BQ9NY57 414 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.48■□□□□ 0.07
COL5A1-201ENST00000371817 ST3GAL5Q9UNP4 418 aa15.48■□□□□ 0.07
COL5A1-201ENST00000371817 NMT2O60551 498 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 IFNA6P05013 189 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 YES1P07947 543 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 GZMAP12544 262 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms