RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 IARS2Q9NSE4 1012 aaKnown RBP29.49■■■□□ 2.31
SSBP3-204ENST00000371320 NUP205Q92621 2012 aa29.49■■■□□ 2.31
SSBP3-204ENST00000371320 TIMM44O43615 452 aa29.49■■■□□ 2.31
SSBP3-204ENST00000371320 ADAMTS4O75173 837 aa29.49■■■□□ 2.31
SSBP3-204ENST00000371320 PGM1P36871 562 aa29.49■■■□□ 2.31
SSBP3-204ENST00000371320 ABCG1P45844 678 aa29.49■■■□□ 2.31
SSBP3-204ENST00000371320 SLC5A3P53794 718 aa29.49■■■□□ 2.31
SSBP3-204ENST00000371320 CSE1LP55060 971 aaKnown RBP29.49■■■□□ 2.31
SSBP3-204ENST00000371320 KCNA10Q16322 511 aa29.49■■■□□ 2.31
SSBP3-204ENST00000371320 KHDC1Q4VXA5 237 aaKnown RBP29.49■■■□□ 2.31
SSBP3-204ENST00000371320 PLD6Q8N2A8 252 aaKnown RBP29.49■■■□□ 2.31
SSBP3-204ENST00000371320 SUSD3Q96L08 255 aa29.49■■■□□ 2.31
SSBP3-204ENST00000371320 CAB39LQ9H9S4 337 aa29.49■■■□□ 2.31
SSBP3-204ENST00000371320 AAR2Q9Y312 384 aaKnown RBP29.49■■■□□ 2.31
SSBP3-204ENST00000371320 A0A096LPK6 155 aa29.48■■■□□ 2.31
SSBP3-204ENST00000371320 SPECC1L-ADORA2AF8WAN1 911 aa29.48■■■□□ 2.31
SSBP3-204ENST00000371320 NMBRP28336 390 aa29.48■■■□□ 2.31
SSBP3-204ENST00000371320 NKX3-2P78367 333 aa29.48■■■□□ 2.31
SSBP3-204ENST00000371320 KDSRQ06136 332 aa29.48■■■□□ 2.31
SSBP3-204ENST00000371320 ITGA9Q13797 1035 aa29.48■■■□□ 2.31
SSBP3-204ENST00000371320 URGCPQ8TCY9 931 aa29.48■■■□□ 2.31
SSBP3-204ENST00000371320 SORT1Q99523 831 aa29.48■■■□□ 2.31
SSBP3-204ENST00000371320 COL4A4P53420 1690 aaPredicted RBP29.48■■■□□ 2.31
SSBP3-204ENST00000371320 ARHGEF37A1IGU5 675 aa29.48■■■□□ 2.31
SSBP3-204ENST00000371320 PAGE1O75459 146 aa29.48■■■□□ 2.31
SSBP3-204ENST00000371320 SLC10A3P09131 477 aa29.48■■■□□ 2.31
SSBP3-204ENST00000371320 DNAJB2P25686 324 aa29.48■■■□□ 2.31
SSBP3-204ENST00000371320 CCR1P32246 355 aa29.48■■■□□ 2.31
SSBP3-204ENST00000371320 GRIK1P39086 918 aa29.48■■■□□ 2.31
SSBP3-204ENST00000371320 FCGRTP55899 365 aa29.48■■■□□ 2.31
SSBP3-204ENST00000371320 ABCE1P61221 599 aaKnown RBP29.48■■■□□ 2.31
SSBP3-204ENST00000371320 TRIM32Q13049 653 aa29.48■■■□□ 2.31
SSBP3-204ENST00000371320 ARHGAP12Q8IWW6 846 aa29.48■■■□□ 2.31
SSBP3-204ENST00000371320 TNS4Q8IZW8 715 aa29.48■■■□□ 2.31
SSBP3-204ENST00000371320 SFMBT1Q9UHJ3 866 aa29.48■■■□□ 2.31
SSBP3-204ENST00000371320 SORCS3Q9UPU3 1222 aa29.48■■■□□ 2.31
SSBP3-204ENST00000371320 APOBEC2Q9Y235 224 aaKnown RBP29.48■■■□□ 2.31
SSBP3-204ENST00000371320 SHROOM3Q8TF72 1996 aa29.47■■■□□ 2.31
SSBP3-204ENST00000371320 PRR5-ARHGAP8B1AHC4 643 aa29.47■■■□□ 2.31
SSBP3-204ENST00000371320 F8W810 466 aa29.47■■■□□ 2.31
SSBP3-204ENST00000371320 CACNG3O60359 315 aa29.47■■■□□ 2.31
SSBP3-204ENST00000371320 SKIP12755 728 aa29.47■■■□□ 2.31
SSBP3-204ENST00000371320 ARHGAP8P85298 464 aa29.47■■■□□ 2.31
SSBP3-204ENST00000371320 UBAP2LQ14157 1087 aaKnown RBP29.47■■■□□ 2.31
SSBP3-204ENST00000371320 KPNB1Q14974 876 aaKnown RBP29.47■■■□□ 2.31
SSBP3-204ENST00000371320 SPATA22Q8NHS9 363 aa29.47■■■□□ 2.31
SSBP3-204ENST00000371320 ZNF570Q96NI8 536 aa29.47■■■□□ 2.31
SSBP3-204ENST00000371320 PNPOQ9NVS9 261 aa29.47■■■□□ 2.31
SSBP3-204ENST00000371320 FGF10O15520 208 aaPredicted RBP29.46■■■□□ 2.31
SSBP3-204ENST00000371320 FLT3LGP49771 235 aa29.46■■■□□ 2.31
SSBP3-204ENST00000371320 DLG2Q15700 870 aa29.46■■■□□ 2.31
SSBP3-204ENST00000371320 KLHDC8BQ8IXV7 354 aa29.46■■■□□ 2.31
SSBP3-204ENST00000371320 RBM15BQ8NDT2 890 aaKnown RBP29.46■■■□□ 2.31
SSBP3-204ENST00000371320 KIFC1Q9BW19 673 aa29.46■■■□□ 2.31
SSBP3-204ENST00000371320 SMOC2Q9H3U7 446 aa29.46■■■□□ 2.31
SSBP3-204ENST00000371320 FAM96AQ9H5X1 160 aa29.46■■■□□ 2.31
SSBP3-204ENST00000371320 CATSPERBQ9H7T0 1116 aa29.46■■■□□ 2.31
SSBP3-204ENST00000371320 GOLGA8TH3BQL2 631 aa29.46■■■□□ 2.31
SSBP3-204ENST00000371320 MSI1O43347 362 aaKnown RBP29.46■■■□□ 2.31
SSBP3-204ENST00000371320 TYMPP19971 482 aa29.46■■■□□ 2.31
SSBP3-204ENST00000371320 HARS2P49590 506 aaKnown RBP29.46■■■□□ 2.31
SSBP3-204ENST00000371320 TUBB3Q13509 450 aa29.46■■■□□ 2.31
SSBP3-204ENST00000371320 ATG14Q6ZNE5 492 aa29.46■■■□□ 2.31
SSBP3-204ENST00000371320 CLEC14AQ86T13 490 aa29.46■■■□□ 2.31
SSBP3-204ENST00000371320 LZTR1Q8N653 840 aa29.46■■■□□ 2.31
SSBP3-204ENST00000371320 CASP10Q92851 521 aa29.46■■■□□ 2.31
SSBP3-204ENST00000371320 VPS39Q96JC1 886 aa29.46■■■□□ 2.31
SSBP3-204ENST00000371320 FCRL2Q96LA5 508 aaPredicted RBP29.46■■■□□ 2.31
SSBP3-204ENST00000371320 ANKRD27Q96NW4 1050 aa29.46■■■□□ 2.31
SSBP3-204ENST00000371320 NMRK2Q9NPI5 230 aa29.46■■■□□ 2.31
SSBP3-204ENST00000371320 C2P06681 752 aa29.45■■■□□ 2.31
SSBP3-204ENST00000371320 ARRB2P32121 409 aa29.45■■■□□ 2.31
SSBP3-204ENST00000371320 HTR7P34969 479 aa29.45■■■□□ 2.31
SSBP3-204ENST00000371320 IRF9Q00978 393 aa29.45■■■□□ 2.31
SSBP3-204ENST00000371320 PDPK2PQ6A1A2 396 aa29.45■■■□□ 2.31
SSBP3-204ENST00000371320 FBXO27Q8NI29 283 aa29.45■■■□□ 2.31
SSBP3-204ENST00000371320 TBL1YQ9BQ87 522 aa29.45■■■□□ 2.31
SSBP3-204ENST00000371320 MCMBPQ9BTE3 642 aa29.45■■■□□ 2.31
SSBP3-204ENST00000371320 YY1AP1Q9H869 796 aa29.45■■■□□ 2.31
SSBP3-204ENST00000371320 NSMCE4AQ9NXX6 385 aa29.45■■■□□ 2.31
SSBP3-204ENST00000371320 NOD1Q9Y239 953 aa29.45■■■□□ 2.31
SSBP3-204ENST00000371320 CCDC78A2IDD5 438 aa29.44■■■□□ 2.3
SSBP3-204ENST00000371320 TNFRSF10BO14763 440 aa29.44■■■□□ 2.3
SSBP3-204ENST00000371320 HOXC13P31276 330 aa29.44■■■□□ 2.3
SSBP3-204ENST00000371320 PGFP49763 221 aa29.44■■■□□ 2.3
SSBP3-204ENST00000371320 YWHAHQ04917 246 aaPredicted RBP29.44■■■□□ 2.3
SSBP3-204ENST00000371320 FCRL5Q96RD9 977 aa29.44■■■□□ 2.3
SSBP3-204ENST00000371320 MAFKO60675 156 aa29.44■■■□□ 2.3
SSBP3-204ENST00000371320 MAGEC1O60732 1142 aa29.44■■■□□ 2.3
SSBP3-204ENST00000371320 ANXA9O76027 345 aa29.44■■■□□ 2.3
SSBP3-204ENST00000371320 AOC1P19801 751 aa29.44■■■□□ 2.3
SSBP3-204ENST00000371320 CACNB2Q08289 660 aaPredicted RBP29.44■■■□□ 2.3
SSBP3-204ENST00000371320 ACSBG2Q5FVE4 666 aa29.44■■■□□ 2.3
SSBP3-204ENST00000371320 MANEALQ5VSG8 457 aa29.44■■■□□ 2.3
SSBP3-204ENST00000371320 SCD5Q86SK9 330 aa29.44■■■□□ 2.3
SSBP3-204ENST00000371320 OR6Y1Q8NGX8 325 aa29.44■■■□□ 2.3
SSBP3-204ENST00000371320 SLC39A8Q9C0K1 460 aa29.44■■■□□ 2.3
SSBP3-204ENST00000371320 GLOD4Q9HC38 313 aa29.44■■■□□ 2.3
SSBP3-204ENST00000371320 DNAJC28Q9NX36 388 aa29.44■■■□□ 2.3
SSBP3-204ENST00000371320 SLC39A10Q9ULF5 831 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms