RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 CBWD5Q5RIA9 395 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 ERMARDQ5T6L9 678 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 ICE2Q659A1 982 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 SLFN12LQ6IEE8 588 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 MRM1Q6IN84 353 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 ACAD10Q6JQN1 1059 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 CCDC121Q6ZUS5 278 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 KBTBD6Q86V97 674 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 JAMLQ86YT9 394 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 EXOC8Q8IYI6 725 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 CACNA2D3Q8IZS8 1091 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 RIBC1Q8N443 379 aaPredicted RBP6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 FBXL13Q8NEE6 735 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 OLIG1Q8TAK6 271 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 IPO4Q8TEX9 1081 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 DNAJB3Q8WWF6 145 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 CD101Q93033 1021 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 MAGOHBQ96A72 148 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 SGSM3Q96HU1 749 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 FAXDC2Q96IV6 333 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 CABS1Q96KC9 395 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 SERPINB12Q96P63 405 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 KLHL5Q96PQ7 755 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 ALPK1Q96QP1 1244 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 SRPK1Q96SB4 655 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 CCDC77Q9BR77 488 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 AP1M1Q9BXS5 423 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 MRPL47Q9HD33 250 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 ZDHHC18Q9NUE0 388 aa6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 CGGBP1Q9UFW8 167 aaPredicted RBP6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 PACSIN2Q9UNF0 486 aaPredicted RBP6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 SPTBN1Q01082 2364 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 TLN1Q9Y490 2541 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-202ENST00000368289 KIAA1217Q5T5P2 1943 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 ARID2Q68CP9 1835 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 ESYT3A0FGR9 886 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 LNP1A1A4G5 178 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 E7EVH7 732 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 H0Y8X5 98 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 H0YHG0 523 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 MYO1FO00160 1098 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 RGS16O15492 202 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 GAS8O95995 478 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 STAG3L1P0CL83 205 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 VAV1P15498 845 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 ITGB5P18084 799 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 LAG3P18627 525 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 TBXAS1P24557 533 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 RPL10P27635 214 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 RDXP35241 583 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 COILP38432 576 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 MMP13P45452 471 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 CCR10P46092 362 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 SLC18A1P54219 525 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 ACTN3Q08043 901 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 PDCLQ13371 301 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 MTMR1Q13613 665 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 UAP1Q16222 522 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 KRT71Q3SY84 523 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 CCDC137Q6PK04 289 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 RSPO2Q6UXX9 243 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 TPRG1Q6ZUI0 275 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 CPLX4Q7Z7G2 160 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 SLC13A5Q86YT5 568 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 DAW1Q8N136 415 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 CMASQ8NFW8 434 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 ZNF564Q8TBZ8 553 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 PARD3BQ8TEW8 1205 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 GLG1Q92896 1179 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 ART4Q93070 314 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 GRAMD1AQ96CP6 724 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 CYFIP2Q96F07 1278 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 CHMP6Q96FZ7 201 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 IFT74Q96LB3 600 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 SPATA33Q96N06 139 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 DEPDC7Q96QD5 511 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 EDEM2Q9BV94 578 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 FRMD8P1Q9BZ68 369 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 TMEM117Q9H0C3 514 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 THAP2Q9H0W7 228 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 FAM124BQ9H5Z6 455 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 YY1AP1Q9H869 796 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 RAB20Q9NX57 234 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 SMARCAL1Q9NZC9 954 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 SPG21Q9NZD8 308 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 NOCTQ9UK39 431 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 TBX20Q9UMR3 447 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 EMC9Q9Y3B6 208 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 PCDHB2Q9Y5E7 798 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 PCDHA10Q9Y5I2 948 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 NBASA2RRP1 2371 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 IGSF9BQ9UPX0 1349 aa6.74□□□□□ -1.33
ECHDC1-202ENST00000368289 CCDC195A0A1B0GUA6 201 aa6.73□□□□□ -1.33
ECHDC1-202ENST00000368289 MBLAC1A4D2B0 266 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-202ENST00000368289 CFAP73A6NFT4 308 aa6.73□□□□□ -1.33
ECHDC1-202ENST00000368289 ZSCAN5CA6NGD5 496 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-202ENST00000368289 PSTPIP1O43586 416 aa6.73□□□□□ -1.33
ECHDC1-202ENST00000368289 CHMP2AO43633 222 aa6.73□□□□□ -1.33
ECHDC1-202ENST00000368289 SPOPO43791 374 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms