RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 GCATO75600 419 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 MED26O95402 600 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 SERPINH1P50454 418 aaKnown RBP11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 TP53BP2Q13625 1128 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 S100ZQ8WXG8 99 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 DNAJA2O60884 412 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 NPR3P17342 541 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 LBPP18428 481 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 C1DQ13901 141 aaKnown RBP11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 KRT33BQ14525 404 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 FAM126BQ8IXS8 530 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 QKIQ96PU8 341 aaKnown RBP eCLIP11.98□□□□□ -0.491e-11■■■■■ 59.5
CDC42BPA-202ENST00000366764 NTPCRQ9BSD7 190 aaKnown RBP11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 CYP4F12Q9HCS2 524 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 ACP6Q9NPH0 428 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 TMEM161AQ9NX61 479 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 MATKP42679 507 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 NAGLUP54802 743 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 FOLH1Q04609 750 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 NCF4Q15080 339 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 NR6A1Q15406 480 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 CLVS1Q8IUQ0 354 aaPredicted RBP11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 CHKBQ9Y259 395 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 TRIP11Q15643 1979 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 KLF11O14901 512 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 ZSCAN9O15535 394 aaPredicted RBP11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 CNOT3O75175 753 aaKnown RBP11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 SIN3BO75182 1162 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 B3GAT3O94766 335 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 SOX10P56693 466 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 POU5F1Q01860 360 aaKnown RBP11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 SLC2A14Q8TDB8 520 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 SETD4Q9NVD3 440 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 ZMYND8Q9ULU4 1186 aaPredicted RBP11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 CACNA1CQ13936 2221 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 H3BMM5 538 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 MLYCDO95822 493 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 RRM2P31350 389 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 GRIA4P48058 902 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 RAB10P61026 200 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 C16orf72Q14CZ0 275 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 PSMD5Q16401 504 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 CWF19L1Q69YN2 538 aaKnown RBP11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 TSHZ1Q6ZSZ6 1077 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 TCF12Q99081 682 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 MID1IP1Q9NPA3 183 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 H7C4K7 107 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 PPP1R11O60927 126 aaPredicted RBP11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 EGFRP00533 1210 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 ZCCHC23Q6ZST2 131 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 KIAA0408Q6ZU52 694 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 GALNT15Q8N3T1 639 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 NT5MQ9NPB1 228 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 TRIM24O15164 1050 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 THEMIS2Q5TEJ8 643 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 DDX18Q9NVP1 670 aaKnown RBP11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 PTTG2Q9NZH5 202 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 A0A087WZ62 844 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 SPDYE5A6NIY4 337 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 VAPBO95292 243 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 PRIM2P49643 509 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 ARHGEF7Q14155 803 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 DDR2Q16832 855 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 SPDYE7PQ495Y7 208 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 FDXACB1Q9BRP7 624 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 SLC25A3Q00325 362 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 ZNF177Q13360 481 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 GPR162Q16538 588 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 RGS21Q2M5E4 152 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 TTC7BQ86TV6 843 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 ACTRT2Q8TDY3 377 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 SEMA4DQ92854 862 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 MAGEB10Q96LZ2 347 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 SNRNP25Q9BV90 132 aaKnown RBP11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 RAD51BO15315 384 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 OCM2P0CE71 109 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 OCMP0CE72 109 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 AMPD1P23109 780 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 PSMB4P28070 264 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 RBM15BQ8NDT2 890 aaKnown RBP11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 STAG3L4Q8TBR4 150 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 VPS45Q9NRW7 570 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 FAM183BPQ6ZVS7 135 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 APOL5Q9BWW9 433 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 FGFBP2Q9BYJ0 223 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 ARL8BQ9NVJ2 186 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 KCNK1O00180 336 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 ZNF862O60290 1169 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 CCT8P50990 548 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 TNK2Q07912 1038 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 LCLAT1Q6UWP7 414 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 RPRD1AQ96P16 312 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 KLHL25Q9H0H3 589 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 CDH19Q9H159 772 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 CCDC167Q9P0B6 97 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 TMEM150BA6NC51 233 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 MLH1P40692 756 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 POLD3Q15054 466 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 TRIM60Q495X7 471 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms