RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 KHDC1Q4VXA5 237 aaKnown RBP8.39□□□□□ -1.07
YBX3-204ENST00000366290 NPNTQ6UXI9 565 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 TMEM184AQ6ZMB5 413 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 MAEAQ7L5Y9 396 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 GPBP1Q86WP2 473 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 ZBTB8OSQ8IWT0 167 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 THNSL1Q8IYQ7 743 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 IQUBQ8NA54 791 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 RNF169Q8NCN4 708 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 RASSF8Q8NHQ8 419 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 FEZF2Q8TBJ5 459 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 STAMQ92783 540 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 PPP2R3CQ969Q6 453 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 DNAJC19Q96DA6 116 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 CPB2Q96IY4 423 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 CDCA3Q99618 268 aaPredicted RBP8.39□□□□□ -1.07
YBX3-204ENST00000366290 TCF25Q9BQ70 676 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 TMEM175Q9BSA9 504 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 EIF2AQ9BY44 585 aaKnown RBP8.39□□□□□ -1.07
YBX3-204ENST00000366290 MEGF9Q9H1U4 602 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 NRDE2Q9H7Z3 1164 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 CALCOCO1Q9P1Z2 691 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 STK39Q9UEW8 545 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 PCDHA3Q9Y5H8 950 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 ACTL7AQ9Y615 435 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 DUSP10Q9Y6W6 482 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 CITO14578 2027 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 FRMD3A2A2Y4 597 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 ARL5CA6NH57 179 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 ZBED1O96006 694 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 EDN1P05305 212 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 ALOX15P16050 662 aaPredicted RBP8.38□□□□□ -1.07
YBX3-204ENST00000366290 BMP7P18075 431 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 RHCEP18577 417 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 SCP2P22307 547 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 KCNA5P22460 613 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 CASP1P29466 404 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 NPTX2P47972 431 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 ZNF131P52739 623 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 UBE2HP62256 183 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 RHDQ02161 417 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 TLE1Q04724 770 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 COASYQ13057 564 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 DMP1Q13316 513 aaPredicted RBP8.38□□□□□ -1.07
YBX3-204ENST00000366290 MRPL49Q13405 166 aaKnown RBP8.38□□□□□ -1.07
YBX3-204ENST00000366290 PRPF4BQ13523 1007 aaKnown RBP8.38□□□□□ -1.07
YBX3-204ENST00000366290 GIT2Q14161 759 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 ANO6Q4KMQ2 910 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 SPOUT1Q5T280 376 aaKnown RBP8.38□□□□□ -1.07
YBX3-204ENST00000366290 KRBA2Q6ZNG9 492 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 TMEM173Q86WV6 379 aaPredicted RBP8.38□□□□□ -1.07
YBX3-204ENST00000366290 ZNF280BQ86YH2 543 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 COLGALT2Q8IYK4 626 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 HACE1Q8IYU2 909 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 FAM156AQ8NDB6 213 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 DEPTORQ8TB45 409 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 URGCPQ8TCY9 931 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 IGSF21Q96ID5 467 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 MSLNLQ96KJ4 702 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 IFT74Q96LB3 600 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 C20orf173Q96LM9 149 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 FIZ1Q96SL8 496 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 REEP2Q9BRK0 252 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 TRIM9Q9C026 710 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 TNMDQ9H2S6 317 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 CUEDC2Q9H467 287 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 NXF3Q9H4D5 531 aaKnown RBP8.38□□□□□ -1.07
YBX3-204ENST00000366290 PDZD7Q9H5P4 517 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 PTPRHQ9HD43 1115 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 PARD6AQ9NPB6 346 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 MOCS1Q9NZB8 636 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 ODF2LQ9ULJ1 636 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 USP34Q70CQ2 3546 aa8.38□□□□□ -1.07
YBX3-204ENST00000366290 H3BQ06 376 aaPredicted RBP8.37□□□□□ -1.07
YBX3-204ENST00000366290 ZC3H11AO75152 810 aaKnown RBP eCLIP8.37□□□□□ -1.07
YBX3-204ENST00000366290 TBX10O75333 385 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 STC2O76061 302 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 DDHD2O94830 711 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 GLP2RO95838 553 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 HRGP04196 525 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 PRKCBP05771 671 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 HOXA5P20719 270 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 PROZP22891 400 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 CNR2P34972 360 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 PBX3P40426 434 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 MLH1P40692 756 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 SLC11A1P49279 550 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 AGFG1P52594 562 aaKnown RBP8.37□□□□□ -1.07
YBX3-204ENST00000366290 CTXN1P60606 82 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 CUL4BQ13620 913 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 DUSP6Q16828 381 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 AFMIDQ63HM1 303 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 CCDC149Q6ZUS6 474 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 ADGRD2Q7Z7M1 963 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 DAAM2Q86T65 1068 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 GPR65Q8IYL9 337 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 RNF168Q8IYW5 571 aaPredicted RBP8.37□□□□□ -1.07
YBX3-204ENST00000366290 MRPL43Q8N983 215 aaKnown RBP8.37□□□□□ -1.07
YBX3-204ENST00000366290 GPT2Q8TD30 523 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 ARL8AQ96BM9 186 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms