RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 Q5PR19 223 aa4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 FAM171A1Q5VUB5 890 aa4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 RUSC1-AS1Q66K80 236 aa4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 PARM1Q6UWI2 310 aa4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 SUGP1Q8IWZ8 645 aaKnown RBP4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 PTGR2Q8N8N7 351 aaPredicted RBP4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 ENAHQ8N8S7 591 aaPredicted RBP4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 KDM1BQ8NB78 822 aa4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 OR6Y1Q8NGX8 325 aa4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 LTV1Q96GA3 475 aaPredicted RBP4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 RPS6KC1Q96S38 1066 aa4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 WDR77Q9BQA1 342 aaPredicted RBP4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 KRTAP1-5Q9BYS1 174 aa4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 MYLK2Q9H1R3 596 aa4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 HIPK2Q9H2X6 1198 aa4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 TASP1Q9H6P5 420 aa4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 CHODLQ9H9P2 273 aa4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 PTPRHQ9HD43 1115 aa4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 CDH22Q9UJ99 828 aa4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 A0A1B0GVT2 93 aa4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 I6L893 689 aaPredicted RBP4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 HNRNPRO43390 633 aaKnown RBP4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 LDHAP00338 332 aaKnown RBP4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 LCKP06239 509 aa4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 ARSAP15289 507 aa4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 CDC25AP30304 524 aa4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 PMS2P54278 862 aa4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 OAZ1P54368 228 aa4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 BIRC2Q13490 618 aa4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 TAF5Q15542 800 aa4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 GXYLT1Q4G148 440 aa4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 ZNF484Q5JVG2 852 aa4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 TMEM71Q6P5X7 295 aa4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 LVRNQ6Q4G3 990 aa4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 IGFN1Q86VF2 1251 aa4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 FSIP1Q8NA03 581 aa4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 LINS1Q8NG48 757 aa4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 ARPC5LQ9BPX5 153 aa4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 ZPBPQ9BS86 351 aa4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 PAGR1Q9BTK6 254 aa4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 B3GNT4Q9C0J1 378 aa4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 ACTR5Q9H9F9 607 aaPredicted RBP4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 THAP1Q9NVV9 213 aa4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 RAP2CQ9Y3L5 183 aa4.93□□□□□ -1.62
RNU4-28P-201ENST00000364739 TARSL2A2RTX5 802 aaKnown RBP4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 B9A039 149 aa4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 STMND1H3BQB6 276 aa4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 PEX14O75381 377 aa4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 CYP1A2P05177 515 aa4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 CYP4B1P13584 511 aa4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 OS9Q13438 667 aaPredicted RBP4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 PKP1Q13835 747 aa4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 GPR18Q14330 331 aa4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 SMAD1Q15797 465 aaKnown RBP4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 C5orf22Q49AR2 442 aa4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 FAM83BQ5T0W9 1011 aa4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 MEPCEQ7L2J0 689 aaKnown RBP4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 BRSK2Q8IWQ3 736 aa4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 DPP10Q8N608 796 aa4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 HORMAD2Q8N7B1 307 aa4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 AFG1LQ8WV93 481 aa4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 LYZL4Q96KX0 146 aa4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 MARK4Q96L34 752 aa4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 FAM167BQ9BTA0 163 aa4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 ZDHHC7Q9NXF8 308 aa4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 PTGDR2Q9Y5Y4 395 aa4.92□□□□□ -1.62
RNU4-28P-201ENST00000364739 DDTLA6NHG4 134 aaPredicted RBP4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 FAM90A8PA6NJQ4 464 aa4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 C17orf100A8MU93 164 aa4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 INAFM1C9JVW0 142 aa4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 NBNO60934 754 aa4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 KLKB1P03952 638 aa4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 FAM90A13PP0C7W8 464 aa4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 FAM90A24PP0C7X0 464 aa4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 PLA2G2AP14555 144 aa4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 CPA1P15085 419 aa4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 CHRNB2P17787 502 aa4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 SELENOVP59797 346 aa4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 AP5B1Q2VPB7 878 aa4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 SYTL3Q4VX76 610 aa4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 VWA5B1Q5TIE3 1220 aa4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 TRILQ7L0X0 811 aa4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 MOGAT3Q86VF5 341 aa4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 GALNT15Q8N3T1 639 aa4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 GABPB2Q8TAK5 448 aaPredicted RBP4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 KTI12Q96EK9 354 aaPredicted RBP4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 RBM17Q96I25 401 aaKnown RBP4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 ZNF479Q96JC4 524 aa4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 PLAC1Q9HBJ0 212 aa4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 G6PC2Q9NQR9 355 aa4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 UPB1Q9UBR1 384 aa4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 ZNF580Q9UK33 172 aa4.91□□□□□ -1.62
RNU4-28P-201ENST00000364739 STX16-NPEPL1H3BU86 382 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 GTPBP1O00178 669 aaKnown RBP4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 STX16O14662 325 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 FAM155BO75949 473 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 TMCC1O94876 653 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 CBX6O95503 412 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms