RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 STAT4Q14765 748 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 DLG2Q15700 870 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 PTPN20Q4JDL3 420 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 SETMARQ53H47 684 aaPredicted RBP8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 BRMS1LQ5PSV4 323 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 SMYD5Q6GMV2 418 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 LRRC31Q6UY01 552 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 PDZD3Q86UT5 571 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 SLC47A2Q86VL8 602 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 IQCHQ86VS3 1027 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 TMPRSS12Q86WS5 348 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 TRIM69Q86WT6 500 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 ZDHHC17Q8IUH5 632 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 FAM114A1Q8IWE2 563 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 MFSD2AQ8NA29 543 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 MLKLQ8NB16 471 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 ATP11CQ8NB49 1132 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 OR52K2Q8NGK3 314 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 PIP4K2CQ8TBX8 421 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 SAP25Q8TEE9 199 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 HNRNPLLQ8WVV9 542 aaKnown RBP8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 NXPE2Q96DL1 559 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 C2orf49Q9BVC5 232 aaPredicted RBP8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 WDCPQ9H6R7 721 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 PLCB1Q9NQ66 1216 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 DYRK4Q9NR20 520 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 PIGVQ9NUD9 493 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 RRN3Q9NYV6 651 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 DNAJC12Q9UKB3 198 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 SARDHQ9UL12 918 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 DMTF1Q9Y222 760 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 PCDHGA1Q9Y5H4 931 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 DSPP15924 2871 aaKnown RBP8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 MYLKQ15746 1914 aa8.4□□□□□ -1.06
RNU4-59P-201ENST00000364447 ATRXP46100 2492 aa8.4□□□□□ -1.07
RNU4-59P-201ENST00000364447 FREM2Q5SZK8 3169 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 DOCK4Q8N1I0 1966 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 E9PAM4 449 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 PRAMEF26H0Y7S4 382 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 FOXN3O00409 490 aaPredicted RBP8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 KPNA3O00505 521 aaPredicted RBP8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 PES1O00541 588 aaKnown RBP8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 MCF2LO15068 1137 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 F9P00740 461 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 C1SP09871 688 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 PNMA6AP0CW24 399 aaPredicted RBP8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 PRKCSHP14314 528 aaPredicted RBP8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 JUPP14923 745 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 ACADVLP49748 655 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 DEUP1Q05D60 604 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 CCDC15Q0P6D6 951 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 OVGP1Q12889 678 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 DNAJC3Q13217 504 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 CAMK2BQ13554 666 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 RAPGEF1Q13905 1077 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 SHBQ15464 509 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 MAN2A1Q16706 1144 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 HS1BP3Q53T59 392 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 C6orf118Q5T5N4 469 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 FAM102AQ5T9C2 384 aaPredicted RBP8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 AGBL4Q5VU57 503 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 SH2D3CQ8N5H7 860 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 TMEM35BQ8NCS4 154 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 MSANTD4Q8NCY6 345 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 ZNF397Q8NF99 534 aaPredicted RBP8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 FAM131CQ96AQ9 280 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 ALG14Q96F25 216 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 LRIG1Q96JA1 1093 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 TKTL2Q9H0I9 626 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 ERVMER34-1Q9H9K5 563 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 PREBQ9HCU5 417 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 SIX2Q9NPC8 291 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 SCUBE2Q9NQ36 999 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 AJAP1Q9UKB5 411 aaPredicted RBP8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 PPM1HQ9ULR3 514 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 HS3ST2Q9Y278 367 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 TBC1D30Q9Y2I9 924 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 OR51B4Q9Y5P0 310 aa8.39□□□□□ -1.07
RNU4-59P-201ENST00000364447 FAM170AA1A519 330 aa8.38□□□□□ -1.07
RNU4-59P-201ENST00000364447 C10orf142B7Z368 130 aa8.38□□□□□ -1.07
RNU4-59P-201ENST00000364447 SNAP91O60641 907 aa8.38□□□□□ -1.07
RNU4-59P-201ENST00000364447 RNGTTO60942 597 aaKnown RBP8.38□□□□□ -1.07
RNU4-59P-201ENST00000364447 SDC3O75056 442 aa8.38□□□□□ -1.07
RNU4-59P-201ENST00000364447 CNTN5O94779 1100 aa8.38□□□□□ -1.07
RNU4-59P-201ENST00000364447 ADCY5O95622 1261 aa8.38□□□□□ -1.07
RNU4-59P-201ENST00000364447 PRNPP04156 253 aa8.38□□□□□ -1.07
RNU4-59P-201ENST00000364447 SRCP12931 536 aa8.38□□□□□ -1.07
RNU4-59P-201ENST00000364447 CKMT2P17540 419 aa8.38□□□□□ -1.07
RNU4-59P-201ENST00000364447 TFE3P19532 575 aaPredicted RBP8.38□□□□□ -1.07
RNU4-59P-201ENST00000364447 RRM1P23921 792 aa8.38□□□□□ -1.07
RNU4-59P-201ENST00000364447 OR1E1P30953 314 aa8.38□□□□□ -1.07
RNU4-59P-201ENST00000364447 CHRNA3P32297 505 aa8.38□□□□□ -1.07
RNU4-59P-201ENST00000364447 CLCN1P35523 988 aa8.38□□□□□ -1.07
RNU4-59P-201ENST00000364447 RECQLP46063 649 aaPredicted RBP8.38□□□□□ -1.07
RNU4-59P-201ENST00000364447 RXRGP48443 463 aa8.38□□□□□ -1.07
RNU4-59P-201ENST00000364447 CXCR3P49682 368 aa8.38□□□□□ -1.07
RNU4-59P-201ENST00000364447 BNIP3Q12983 259 aa8.38□□□□□ -1.07
RNU4-59P-201ENST00000364447 DRAP1Q14919 205 aaPredicted RBP8.38□□□□□ -1.07
RNU4-59P-201ENST00000364447 ACAP1Q15027 740 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms