RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 TANGO2Q6ICL3 276 aa4.45□□□□□ -1.7
RNU6-553P-201ENST00000364047 CAMK1DQ8IU85 385 aa4.45□□□□□ -1.7
RNU6-553P-201ENST00000364047 SCN4BQ8IWT1 228 aa4.45□□□□□ -1.7
RNU6-553P-201ENST00000364047 MIB2Q96AX9 1013 aa4.45□□□□□ -1.7
RNU6-553P-201ENST00000364047 WDR77Q9BQA1 342 aaPredicted RBP4.45□□□□□ -1.7
RNU6-553P-201ENST00000364047 DDX23Q9BUQ8 820 aaKnown RBP4.45□□□□□ -1.7
RNU6-553P-201ENST00000364047 B3GNT4Q9C0J1 378 aa4.45□□□□□ -1.7
RNU6-553P-201ENST00000364047 CLPBQ9H078 707 aa4.45□□□□□ -1.7
RNU6-553P-201ENST00000364047 TAF1DQ9H5J8 278 aaPredicted RBP4.45□□□□□ -1.7
RNU6-553P-201ENST00000364047 SLC22A11Q9NSA0 550 aa4.45□□□□□ -1.7
RNU6-553P-201ENST00000364047 HIF1ANQ9NWT6 349 aa4.45□□□□□ -1.7
RNU6-553P-201ENST00000364047 PCDHA7Q9UN72 937 aa4.45□□□□□ -1.7
RNU6-553P-201ENST00000364047 RAP2CQ9Y3L5 183 aa4.45□□□□□ -1.7
RNU6-553P-201ENST00000364047 SLC4A4Q9Y6R1 1079 aa4.45□□□□□ -1.7
RNU6-553P-201ENST00000364047 CACNA1IQ9P0X4 2223 aa4.45□□□□□ -1.7
RNU6-553P-201ENST00000364047 CCNT1O60563 726 aaKnown RBP4.44□□□□□ -1.7
RNU6-553P-201ENST00000364047 CBSLP0DN79 551 aa4.44□□□□□ -1.7
RNU6-553P-201ENST00000364047 CHN1P15882 459 aa4.44□□□□□ -1.7
RNU6-553P-201ENST00000364047 CBSP35520 551 aa4.44□□□□□ -1.7
RNU6-553P-201ENST00000364047 MLH1P40692 756 aa4.44□□□□□ -1.7
RNU6-553P-201ENST00000364047 TIGD6Q17RP2 521 aa4.44□□□□□ -1.7
RNU6-553P-201ENST00000364047 KLHL22Q53GT1 634 aa4.44□□□□□ -1.7
RNU6-553P-201ENST00000364047 SYT13Q7L8C5 426 aa4.44□□□□□ -1.7
RNU6-553P-201ENST00000364047 PTGR2Q8N8N7 351 aaPredicted RBP4.44□□□□□ -1.7
RNU6-553P-201ENST00000364047 FSIP1Q8NA03 581 aa4.44□□□□□ -1.7
RNU6-553P-201ENST00000364047 KDM1BQ8NB78 822 aa4.44□□□□□ -1.7
RNU6-553P-201ENST00000364047 ENGASEQ8NFI3 743 aa4.44□□□□□ -1.7
RNU6-553P-201ENST00000364047 GABPB2Q8TAK5 448 aaPredicted RBP4.44□□□□□ -1.7
RNU6-553P-201ENST00000364047 C2CD4CQ8TF44 421 aa4.44□□□□□ -1.7
RNU6-553P-201ENST00000364047 URB1-AS1Q96HZ7 61 aa4.44□□□□□ -1.7
RNU6-553P-201ENST00000364047 NTPCRQ9BSD7 190 aaKnown RBP4.44□□□□□ -1.7
RNU6-553P-201ENST00000364047 ACAD9Q9H845 621 aa4.44□□□□□ -1.7
RNU6-553P-201ENST00000364047 PLAC1Q9HBJ0 212 aa4.44□□□□□ -1.7
RNU6-553P-201ENST00000364047 PLK2Q9NYY3 685 aa4.44□□□□□ -1.7
RNU6-553P-201ENST00000364047 KLQ9UEF7 1012 aa4.44□□□□□ -1.7
RNU6-553P-201ENST00000364047 MYO6Q9UM54 1294 aa4.44□□□□□ -1.7
RNU6-553P-201ENST00000364047 TMEM247A6NEH6 219 aa4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 FAM90A20PA6NIJ5 464 aa4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 BECN2A8MW95 431 aa4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 SYN3O14994 580 aa4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 KRT38O76015 456 aa4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 FCGR2AP12318 317 aa4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 ARSBP15848 533 aa4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 CHRNB2P17787 502 aa4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 SELENOVP59797 346 aa4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 ZXDBP98169 803 aa4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 ROR2Q01974 943 aaKnown RBP4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 ZNF585BQ52M93 769 aa4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 CCDC174Q6PII3 467 aa4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 CADM3Q8N126 398 aa4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 RUBCNQ92622 972 aa4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 GOLGA1Q92805 767 aa4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 IFT27Q9BW83 186 aa4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 POLDIP3Q9BY77 421 aaKnown RBP4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 CATSPERBQ9H7T0 1116 aa4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 ZDHHC7Q9NXF8 308 aa4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 WWOXQ9NZC7 414 aa4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 LRP12Q9Y561 859 aa4.43□□□□□ -1.7
RNU6-553P-201ENST00000364047 OR6C75A6NL08 312 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 E7EVH7 732 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 STMND1H3BQB6 276 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 GTPBP1O00178 669 aaKnown RBP4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 IPO5O00410 1097 aaKnown RBP4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 TMCC1O94876 653 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 UNGP13051 313 aaPredicted RBP4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 CYP4B1P13584 511 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 ACP5P13686 325 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 PRKCHP24723 683 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 CST5P28325 142 aaPredicted RBP4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 RPS6KA3P51812 740 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 RBM5P52756 815 aaKnown RBP eCLIP4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 TTC3P53804 2025 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 PRKAA2P54646 552 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 RUNDC3AQ59EK9 446 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 OTUD1Q5VV17 481 aaPredicted RBP4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 DCAF12L2Q5VW00 463 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 JMJD6Q6NYC1 403 aaPredicted RBP4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 PDXDC1Q6P996 788 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 GALNT7Q86SF2 657 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 BRSK2Q8IWQ3 736 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 HORMAD2Q8N7B1 307 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 OR6Y1Q8NGX8 325 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 CSGALNACT1Q8TDX6 532 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 FRG2BQ96QU4 278 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 CADM1Q9BY67 442 aaKnown RBP4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 DCLK3Q9C098 648 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 PLEKHA2Q9HB19 425 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 G6PC2Q9NQR9 355 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 PLEKHB1Q9UF11 243 aaPredicted RBP4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 SRP68Q9UHB9 627 aaKnown RBP4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 FZD10Q9ULW2 581 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 PTGDR2Q9Y5Y4 395 aa4.42□□□□□ -1.7
RNU6-553P-201ENST00000364047 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.41□□□□□ -1.7
RNU6-553P-201ENST00000364047 A0A1B0GVT2 93 aa4.41□□□□□ -1.7
RNU6-553P-201ENST00000364047 SAC3D1A6NKF1 404 aa4.41□□□□□ -1.7
RNU6-553P-201ENST00000364047 INAFM1C9JVW0 142 aa4.41□□□□□ -1.7
RNU6-553P-201ENST00000364047 SEPT4O43236 478 aa4.41□□□□□ -1.7
RNU6-553P-201ENST00000364047 RGS14O43566 566 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms