RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 GPS2Q13227 327 aa14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 KCNJ11Q14654 390 aa14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 ALFQ53S48 1182 aa14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 CFAP58Q5T655 872 aa14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 GPR158Q5T848 1215 aa14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 ALS2CLQ60I27 953 aa14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 ITPRIPL1Q6GPH6 555 aa14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 TFAP2DQ7Z6R9 452 aa14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 TAB3Q8N5C8 712 aaPredicted RBP14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 NAT8LQ8N9F0 302 aa14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 DEPDC1BQ8WUY9 529 aa14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 UBLCP1Q8WVY7 318 aaPredicted RBP14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 SMG7Q92540 1137 aaKnown RBP14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 EXOC4Q96A65 974 aa14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 CYP2S1Q96SQ9 504 aa14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 RUFY1Q96T51 708 aa14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 FRMD8Q9BZ67 464 aaPredicted RBP14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 PHACTR1Q9C0D0 580 aa14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 SLC39A8Q9C0K1 460 aa14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 TASP1Q9H6P5 420 aa14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 KLHL8Q9P2G9 620 aaPredicted RBP14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 DNMT3BQ9UBC3 853 aaKnown RBP14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 STOML2Q9UJZ1 356 aa14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 TRHDEQ9UKU6 1024 aa14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 ZNF510Q9Y2H8 683 aa14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 SH3BP1Q9Y3L3 701 aa14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 FAM186AA6NE01 2351 aa14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 DMDP11532 3685 aa14.17□□□□□ -0.14
PDLIM5-203ENST00000359265 ZFHX4Q86UP3 3567 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 A0A1B0GVM2 712 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 TYW5A2RUC4 315 aaKnown RBP14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 GOLGA6BA6NDN3 693 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 TCAF2A6NFQ2 919 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 PROB1E7EW31 1015 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 H0Y858 1186 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 EIF3HO15372 352 aaKnown RBP eCLIP14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 RAMP2O60895 175 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 PTPN3P26045 913 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 HSD17B3P37058 310 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 MAGEA6P43360 314 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 CDH4P55283 916 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 ARL4CP56559 192 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 YBEYP58557 167 aaPredicted RBP14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 WASHC5Q12768 1159 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 TEAD2Q15562 447 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 ANO4Q32M45 955 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 PARP15Q460N3 678 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 FAXCQ5TGI0 409 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 RFWD3Q6PCD5 774 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 TRIM67Q6ZTA4 783 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 CENPUQ71F23 418 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 TRMT10CQ7L0Y3 403 aaKnown RBP14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 CHST9Q7L1S5 443 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 CIR1Q86X95 450 aaPredicted RBP14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 WBP2Q969T9 261 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 ZNF707Q96C28 371 aaPredicted RBP14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 PRICKLE1Q96MT3 831 aaPredicted RBP14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 SP110Q9HB58 689 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 NDFIP2Q9NV92 336 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 CFAP97Q9P2B7 532 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 AGO1Q9UL18 857 aaKnown RBP14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 ARHGAP26Q9UNA1 814 aa14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 ZFP37Q9Y6Q3 630 aaPredicted RBP14.16□□□□□ -0.14
PDLIM5-203ENST00000359265 PRR23AA6NEV1 266 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 RASA4BC9J798 803 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 E7EVH7 732 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 KCNK1O00180 336 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 RASA4O43374 803 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 MAFKO60675 156 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 TMEM63AO94886 807 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 TPSB2P20231 275 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 OR1E1P30953 314 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 CCR2P41597 374 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 IFI35P80217 286 aaPredicted RBP14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 SEMA5AQ13591 1074 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 TPSAB1Q15661 275 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 HIF1AQ16665 826 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 STXBP5Q5T5C0 1151 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 ANKRD22Q5VYY1 191 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 ANKRD54Q6NXT1 300 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 Q6ZNB5 142 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 PID1Q7Z2X4 250 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 GRASPQ7Z6J2 395 aaPredicted RBP14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 RELL1Q8IUW5 271 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 ZNF567Q8N184 647 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 HJURPQ8NCD3 748 aaPredicted RBP14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 VN1R2Q8NFZ6 395 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 FATE1Q969F0 183 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 CNTNAP3BQ96NU0 1288 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 RBM15Q96T37 977 aaKnown RBP eCLIP14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 SLC46A2Q9BY10 475 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 CNTNAP3Q9BZ76 1288 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 PABPC3Q9H361 631 aaKnown RBP14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 NOL6Q9H6R4 1146 aaKnown RBP14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 ETNK1Q9HBU6 452 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 IGSF9Q9P2J2 1179 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 ZNF212Q9UDV6 495 aa14.15□□□□□ -0.14
PDLIM5-203ENST00000359265 MOSPD3O75425 235 aa14.14□□□□□ -0.15
PDLIM5-203ENST00000359265 CLDN11O75508 207 aa14.14□□□□□ -0.15
PDLIM5-203ENST00000359265 NEBLO76041 1014 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms