RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 PADI6Q6TGC4 694 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 RNF19BQ6ZMZ0 732 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 LSMEM2Q8N112 164 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 DEPDC1BQ8WUY9 529 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 STON2Q8WXE9 905 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 PBXIP1Q96AQ6 731 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 C17orf80Q9BSJ5 609 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 ZBTB26Q9HCK0 441 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 PCDH12Q9NPG4 1184 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 FAM172BPA6NC97 362 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 HOXC11O43248 304 aaPredicted RBP13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 ICMTO60725 284 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 CALB1P05937 261 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 C7P10643 843 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 ACO1P21399 889 aaKnown RBP13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 EEF1DP29692 281 aaKnown RBP13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 GNA15P30679 374 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 CLK3P49761 638 aaKnown RBP13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 HSPA2P54652 639 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 TAP1Q03518 808 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 CDC20Q12834 499 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 FAM182AQ5T1J6 154 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 UGT3A1Q6NUS8 523 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 DCUN1D2Q6PH85 259 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 SLC30A10Q6XR72 485 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 CYS1Q717R9 158 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 PARP8Q8N3A8 854 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 TDRD5Q8NAT2 981 aaKnown RBP13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 ZUFSPQ96AP4 578 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 TMA16Q96EY4 203 aaKnown RBP13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 VMP1Q96GC9 406 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 CSF3RQ99062 836 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 PCDHAC1Q9H158 963 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 ARMC1Q9NVT9 282 aa13.54□□□□□ -0.24
SPTSSB-201ENST00000359175 TPP1O14773 563 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 AREL1O15033 823 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 AMHP03971 560 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 KRT7P08729 469 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 MBL2P11226 248 aaPredicted RBP13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 MX2P20592 715 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 SLC25A11Q02978 314 aaKnown RBP13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 GABPAQ06546 454 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 LRIT3Q3SXY7 679 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 IQSEC1Q6DN90 963 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 DNAJC24Q6P3W2 148 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 ERMP1Q7Z2K6 904 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 SEPT8Q92599 483 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 PPWD1Q96BP3 646 aaKnown RBP13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 SLC39A3Q9BRY0 314 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 TRIT1Q9H3H1 467 aaKnown RBP13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 ADA2Q9NZK5 511 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 PAK5Q9P286 719 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 PCDHGA7Q9Y5G6 932 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 GOLGA8QA0A0J9YX86 632 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 GOLGA8OA6NCC3 632 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 TCAF2A6NFQ2 919 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 GOLGA8NF8WBI6 632 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 ALX3O95076 343 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 MAGEA6P43360 314 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 MAPK10P53779 464 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 ROR1Q01973 937 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 ERFEQ4G0M1 354 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 BRDTQ58F21 947 aaPredicted RBP13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 LDLRAP1Q5SW96 308 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 GTF2IRD2BQ6EKJ0 949 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 TAS2R42Q7RTR8 314 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 GTF2IRD2Q86UP8 949 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 KIAA2013Q8IYS2 634 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 ANKRD13AQ8IZ07 590 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 CBR4Q8N4T8 237 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 SPATA18Q8TC71 538 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 SNX19Q92543 992 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 LPGAT1Q92604 370 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 WDR18Q9BV38 432 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 ATP13A3Q9H7F0 1226 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 CPNE5Q9HCH3 593 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 RAB6BQ9NRW1 208 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 TMEM216Q9P0N5 145 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 GPSM3Q9Y4H4 160 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 SLX4Q8IY92 1834 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 COL5A2P05997 1499 aaPredicted RBP13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 RAD23AP54725 363 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 PSME3P61289 254 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 RPS8P62241 208 aaKnown RBP13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 ENPEPQ07075 957 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 TMTC4Q5T4D3 741 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 CCSAPQ6IQ19 270 aaPredicted RBP13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 DARS2Q6PI48 645 aaKnown RBP13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 KCNT2Q6UVM3 1135 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 MUC3BQ9H195 1237 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 WDR55Q9H6Y2 383 aaPredicted RBP13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 MOCS1Q9NZB8 636 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 HACD3Q9P035 362 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 SLC9A2Q9UBY0 812 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 PCDHA11Q9Y5I1 949 aa13.53□□□□□ -0.24
SPTSSB-201ENST00000359175 CDK2AP1O14519 115 aa13.52□□□□□ -0.24
SPTSSB-201ENST00000359175 TRIM24O15164 1050 aa13.52□□□□□ -0.24
SPTSSB-201ENST00000359175 TIPRLO75663 272 aa13.52□□□□□ -0.24
SPTSSB-201ENST00000359175 SSTR3P32745 418 aaPredicted RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms