RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 BTBD7Q9P203 1132 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 A0A087WXM4 84 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 ZNF839A8K0R7 811 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 ATP5F1P24539 256 aaPredicted RBP13.93□□□□□ -0.18
VCP-201ENST00000358901 TM4SF1P30408 202 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 ATP1A4Q13733 1029 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 PPP1R26Q5T8A7 1209 aaPredicted RBP13.93□□□□□ -0.18
VCP-201ENST00000358901 PACS1Q6VY07 963 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 RIOX2Q8IUF8 465 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 CPT1BQ92523 772 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 NKD2Q969F2 451 aaPredicted RBP13.93□□□□□ -0.18
VCP-201ENST00000358901 SEMA4BQ9NPR2 832 aaPredicted RBP13.93□□□□□ -0.18
VCP-201ENST00000358901 TLR8Q9NR97 1041 aaKnown RBP13.93□□□□□ -0.18
VCP-201ENST00000358901 SNX15Q9NRS6 342 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 RPL26L1Q9UNX3 145 aaKnown RBP13.93□□□□□ -0.18
VCP-201ENST00000358901 PCDHB5Q9Y5E4 795 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 FAM155BO75949 473 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 EPB42P16452 691 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 FMO4P31512 558 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 MSX2P35548 267 aaPredicted RBP13.93□□□□□ -0.18
VCP-201ENST00000358901 GSSP48637 474 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 CHN2P52757 468 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 CTBP1Q13363 440 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 RIPK1Q13546 671 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 VGLL4Q14135 290 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 MFSD10Q14728 455 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 PDK3Q15120 406 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 PIWIL4Q7Z3Z4 852 aaKnown RBP13.93□□□□□ -0.18
VCP-201ENST00000358901 TLK2Q86UE8 772 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.93□□□□□ -0.18
VCP-201ENST00000358901 SPATA6LQ8N4H0 392 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 OR56A4Q8NGH8 313 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 MRPS31Q92665 395 aaKnown RBP13.93□□□□□ -0.18
VCP-201ENST00000358901 RCN3Q96D15 328 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 CDCA5Q96FF9 252 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 C9orf16Q9BUW7 83 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 TMEM109Q9BVC6 243 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 NMRK1Q9NWW6 199 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 COPG2Q9UBF2 871 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 XPR1Q9UBH6 696 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 IGLV3-22A0A075B6J6 115 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 ALOX15P16050 662 aaPredicted RBP13.92□□□□□ -0.18
VCP-201ENST00000358901 TFEBP19484 476 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 PSME3P61289 254 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 MRPL28Q13084 256 aaKnown RBP13.92□□□□□ -0.18
VCP-201ENST00000358901 NOMO1Q15155 1222 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 SLC44A1Q8WWI5 657 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 P2RY11Q96G91 374 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 MAML3Q96JK9 1138 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 ZFYVE19Q96K21 471 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 NDNQ99608 321 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 TBCDQ9BTW9 1192 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 USE1Q9NZ43 259 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 GRHL1Q9NZI5 618 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 ZMYM5Q9UJ78 669 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 TMEM114B3SHH9 223 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 BIRC5O15392 142 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 BPGMP07738 259 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 AXLP30530 894 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 ZDHHC13Q8IUH4 622 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 HGH1Q9BTY7 390 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 RIPK3Q9Y572 518 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 ATXN2Q99700 1313 aaKnown RBP13.92□□□□□ -0.18
VCP-201ENST00000358901 IRF6O14896 467 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 PAPSS1O43252 624 aaPredicted RBP13.92□□□□□ -0.18
VCP-201ENST00000358901 PEX11AO75192 247 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 SEC22BO75396 215 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 LTA4HP09960 611 aaKnown RBP13.92□□□□□ -0.18
VCP-201ENST00000358901 LBPP18428 481 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 CDKN2BP42772 138 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 PTGIRP43119 386 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 GABRB2P47870 512 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 CLK2P49760 499 aaKnown RBP13.92□□□□□ -0.18
VCP-201ENST00000358901 GBE1Q04446 702 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 CCDC142Q17RM4 750 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 MON1BQ7L1V2 547 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 GLT6D1Q7Z4J2 308 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 ZCCHC7Q8N3Z6 543 aaKnown RBP13.92□□□□□ -0.18
VCP-201ENST00000358901 FBXO5Q9UKT4 447 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 TMCC3Q9ULS5 477 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 RPTORQ8N122 1335 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 ERBB2P04626 1255 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 CCNB1P14635 433 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 HNRNPLP14866 589 aaKnown RBP eCLIP13.92□□□□□ -0.18
VCP-201ENST00000358901 YWHAQP27348 245 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 ZNF135P52742 658 aaPredicted RBP13.92□□□□□ -0.18
VCP-201ENST00000358901 KCTD21Q4G0X4 260 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 MARK2Q7KZI7 788 aaKnown RBP13.92□□□□□ -0.18
VCP-201ENST00000358901 ARHGAP22Q7Z5H3 698 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 NECAB2Q7Z6G3 386 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 MILR1Q7Z6M3 343 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 SPPL2AQ8TCT8 520 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 UTP15Q8TED0 518 aaKnown RBP13.92□□□□□ -0.18
VCP-201ENST00000358901 SIX2Q9NPC8 291 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 DMAC2Q9NW81 257 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 SYBUQ9NX95 663 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 RABGEF1Q9UJ41 708 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 NOCTQ9UK39 431 aaKnown RBP13.92□□□□□ -0.18
VCP-201ENST00000358901 ADAM28Q9UKQ2 775 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 CLCA2Q9UQC9 943 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms