RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 BUD23O43709 281 aaKnown RBP12.48□□□□□ -0.41
COL20A1-201ENST00000358894 MSX2P35548 267 aaPredicted RBP12.48□□□□□ -0.41
COL20A1-201ENST00000358894 NPY2RP49146 381 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 SFSWAPQ12872 951 aaKnown RBP12.48□□□□□ -0.41
COL20A1-201ENST00000358894 PRKAA1Q13131 559 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 PTK2BQ14289 1009 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 FSCN1Q16658 493 aaKnown RBP12.48□□□□□ -0.41
COL20A1-201ENST00000358894 SH3D19Q5HYK7 790 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 NOL9Q5SY16 702 aaKnown RBP12.48□□□□□ -0.41
COL20A1-201ENST00000358894 SLC41A1Q8IVJ1 513 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 KCTD4Q8WVF5 259 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 ACE2Q9BYF1 805 aaPredicted RBP12.48□□□□□ -0.41
COL20A1-201ENST00000358894 CDHR5Q9HBB8 845 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 DMAP1Q9NPF5 467 aaPredicted RBP12.48□□□□□ -0.41
COL20A1-201ENST00000358894 SNX10Q9Y5X0 201 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 STBD1O95210 358 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 TPSB2P20231 275 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 RGS2P41220 211 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 ARHGAP1Q07960 439 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 TPSAB1Q15661 275 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 RBBP7Q16576 425 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 ZBTB46Q86UZ6 589 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 KIAA2013Q8IYS2 634 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 DCP1BQ8IZD4 617 aaKnown RBP12.47□□□□□ -0.41
COL20A1-201ENST00000358894 GALNT15Q8N3T1 639 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 SHCBP1Q8NEM2 672 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 EGFL8Q99944 293 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 EBF4Q9BQW3 602 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 SSU72Q9NP77 194 aaKnown RBP12.47□□□□□ -0.41
COL20A1-201ENST00000358894 NCF1BA6NI72 391 aaPredicted RBP12.47□□□□□ -0.41
COL20A1-201ENST00000358894 NCF1CA8MVU1 366 aaPredicted RBP12.47□□□□□ -0.41
COL20A1-201ENST00000358894 C2P06681 752 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 SERPINA6P08185 405 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 NCF1P14598 390 aaPredicted RBP12.47□□□□□ -0.41
COL20A1-201ENST00000358894 SMPD1P17405 629 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 CRHR1P34998 444 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 MRPS22P82650 360 aaKnown RBP12.47□□□□□ -0.41
COL20A1-201ENST00000358894 GDPD5Q8WTR4 605 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 QKIQ96PU8 341 aaKnown RBP eCLIP12.47□□□□□ -0.41
COL20A1-201ENST00000358894 IL22Q9GZX6 179 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 WDR55Q9H6Y2 383 aaPredicted RBP12.47□□□□□ -0.41
COL20A1-201ENST00000358894 CHRAC1Q9NRG0 131 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 NDFIP2Q9NV92 336 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 ATXN10Q9UBB4 475 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 ZNF212Q9UDV6 495 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 COL2A1P02458 1487 aaPredicted RBP12.47□□□□□ -0.41
COL20A1-201ENST00000358894 SMNDC1O75940 238 aaKnown RBP eCLIP12.47□□□□□ -0.41
COL20A1-201ENST00000358894 CLPTM1O96005 669 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 PTPN9P43378 593 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 CDK7P50613 346 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 CLDN10P78369 228 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 WASHC5Q12768 1159 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 PEX6Q13608 980 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 FAM35AQ86V20 835 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 ZNF567Q8N184 647 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 ACMSDQ8TDX5 336 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 TUBGCP3Q96CW5 907 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 KLHL4Q9C0H6 718 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 ZNF358Q9NW07 568 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 TEX264Q9Y6I9 313 aa12.47□□□□□ -0.41
COL20A1-201ENST00000358894 FAM95CA0A1B0GW59 222 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 ZBTB24O43167 697 aaPredicted RBP12.46□□□□□ -0.41
COL20A1-201ENST00000358894 TYROBPO43914 113 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 PGK1P00558 417 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 ATP6V1C1P21283 382 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 L1CAMP32004 1257 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 TWF1Q12792 350 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 MARC1Q5VT66 337 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 TAF2Q6P1X5 1199 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.46□□□□□ -0.41
COL20A1-201ENST00000358894 FBXO32Q969P5 355 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 TBC1D23Q9NUY8 699 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 CCDC167Q9P0B6 97 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 NKX1-2Q9UD57 310 aaPredicted RBP12.46□□□□□ -0.41
COL20A1-201ENST00000358894 SNX13Q9Y5W8 968 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 SLX4Q8IY92 1834 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 BTBD19C9JJ37 291 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 BIRC5O15392 142 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 DAB1O75553 588 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 SRP72O76094 671 aaKnown RBP12.46□□□□□ -0.41
COL20A1-201ENST00000358894 RHOBTB1O94844 696 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 BRCC3P46736 316 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 LILRA4P59901 499 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 PLIN5Q00G26 463 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 STX5Q13190 355 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 KCNJ11Q14654 390 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 DLG2Q15700 870 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 LRRC8BQ6P9F7 803 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 XIRP1Q702N8 1843 aaKnown RBP12.46□□□□□ -0.41
COL20A1-201ENST00000358894 LZICQ8WZA0 190 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 PBXIP1Q96AQ6 731 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 TBL1YQ9BQ87 522 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 DCUN1D5Q9BTE7 237 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 TRIM15Q9C019 465 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 RNF39Q9H2S5 420 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 HACD3Q9P035 362 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 TMEM216Q9P0N5 145 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 FAM8A1Q9UBU6 413 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 BAG5Q9UL15 447 aa12.46□□□□□ -0.41
COL20A1-201ENST00000358894 MFHAS1Q9Y4C4 1052 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms