RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 SNRNP48Q6IEG0 339 aaKnown RBP6.17□□□□□ -1.42
VPS13B-203ENST00000358544 SYCE2Q6PIF2 218 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 NAT9Q9BTE0 207 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 GPATCH2LQ9NWQ4 482 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 A0A096LPK6 155 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 ERVV-1B6SEH8 477 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 K7EPI3 171 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 NDUFS3O75489 264 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 ERCC2P18074 760 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 HNF4AP41235 474 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 GABRB2P47870 512 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 EMC2Q15006 297 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 HERC3Q15034 1050 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 STXBP2Q15833 593 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 PKN1Q16512 942 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 NAPEPLDQ6IQ20 393 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 MYO1HQ8N1T3 1032 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 VPS9D1Q9Y2B5 631 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 TRIP12Q14669 1992 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-203ENST00000358544 RECQL5O94762 991 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-203ENST00000358544 CYP24A1Q07973 514 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 SCRN3Q0VDG4 424 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 AARS2Q5JTZ9 985 aaKnown RBP6.17□□□□□ -1.42
VPS13B-203ENST00000358544 BANPQ8N9N5 519 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 PNPT1Q8TCS8 783 aaKnown RBP6.17□□□□□ -1.42
VPS13B-203ENST00000358544 ARMC7Q9H6L4 198 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 NMRAL1Q9HBL8 299 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 TBX22Q9Y458 520 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 CDC42BPAQ5VT25 1732 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 GPR75-ASB3A0A0A6YYF3 556 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 ALOX15BO15296 676 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 ORC5O43913 435 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 TNK2Q07912 1038 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 ARHGAP36Q6ZRI8 547 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 YTHDF1Q9BYJ9 559 aaKnown RBP6.17□□□□□ -1.42
VPS13B-203ENST00000358544 HSD3B7Q9H2F3 369 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 TBC1D22BQ9NU19 505 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 CPSF3Q9UKF6 684 aaKnown RBP6.17□□□□□ -1.42
VPS13B-203ENST00000358544 ASB3Q9Y575 518 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 H6PDO95479 791 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 ABL2P42684 1182 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 CD97P48960 835 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 STILQ15468 1287 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 PKN3Q6P5Z2 889 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 PGAM4Q8N0Y7 254 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 EFHD2Q96C19 240 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-203ENST00000358544 CENPNQ96H22 339 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-203ENST00000358544 HEG1Q9ULI3 1381 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 BCKDKO14874 412 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 PRKD3O94806 890 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 SUPT7LO94864 414 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 CD151P48509 253 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 TRIM32Q13049 653 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 BHLHB9Q6PI77 547 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 ANKRD23Q86SG2 305 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 TDRPQ86YL5 185 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 CBWD2Q8IUF1 395 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 TBC1D21Q8IYX1 336 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 MYLPFQ96A32 169 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 FICDQ9BVA6 458 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 MUC13Q9H3R2 512 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 C3orf18Q9UK00 162 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 RNF112Q9ULX5 631 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 EFR3BQ9Y2G0 817 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 AP3M1Q9Y2T2 418 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 HEATR5BQ9P2D3 2071 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 KIAA1210Q9ULL0 1709 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 FBP2O00757 339 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 HAT1O14929 419 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 ACTRT2Q8TDY3 377 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 TP53INP1Q96A56 240 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 A0A0J9YVX5 310 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 F8W810 466 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 PLK4O00444 970 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 S100A6P06703 90 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 DNAJC14Q6Y2X3 702 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-203ENST00000358544 KIAA0408Q6ZU52 694 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 RNASE11Q8TAA1 199 aaKnown RBP6.16□□□□□ -1.42
VPS13B-203ENST00000358544 UGT2B28Q9BY64 529 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 TMCC3Q9ULS5 477 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 NOD1Q9Y239 953 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 GPR179Q6PRD1 2367 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 CDC42BPBQ9Y5S2 1711 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 TCRBV9S1A1TA0A576 114 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 ALDH4A1P30038 563 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 ADSLP30566 484 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-203ENST00000358544 LCN1P1Q5VSP4 162 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 TWF2Q6IBS0 349 aaKnown RBP6.16□□□□□ -1.42
VPS13B-203ENST00000358544 TTYH1Q9H313 450 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-203ENST00000358544 PKP3Q9Y446 797 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 ABCA2Q9BZC7 2435 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 FAM172BPA6NC97 362 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 SNRPB2P08579 225 aaKnown RBP6.16□□□□□ -1.42
VPS13B-203ENST00000358544 HALP42357 657 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 TMEM132DQ14C87 1099 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 BICRALQ6AI39 1079 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 CACTIN-AS1Q8N1I8 211 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 PIK3C3Q8NEB9 887 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 TSEN34Q9BSV6 310 aaKnown RBP6.16□□□□□ -1.42
VPS13B-203ENST00000358544 PSME2Q9UL46 239 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms