RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 PDGFCQ9NRA1 345 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 ASIC3Q9UHC3 531 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 CDH22Q9UJ99 828 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 RIMS3Q9UJD0 308 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 UGT2A1Q9Y4X1 527 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 ARHGEF35A5YM69 484 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 POLR1CO15160 346 aaPredicted RBP9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 HDAC3O15379 428 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 CYP3A4P08684 503 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 ITIH2P19823 946 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 EIF3EP60228 445 aaKnown RBP9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 TRAF2Q12933 501 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 NME3Q13232 169 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 CCL14Q16627 93 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 IGSF11Q5DX21 431 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 XKR9Q5GH70 373 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 SNAP47Q5SQN1 464 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 LDLRAP1Q5SW96 308 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 FAM205BPQ63HN1 556 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 CNNM4Q6P4Q7 775 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 CPNE8Q86YQ8 564 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 NSUN6Q8TEA1 469 aaKnown RBP9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 C7orf26Q96N11 449 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 CCDC77Q9BR77 488 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 EMILIN2Q9BXX0 1053 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 GCOM2Q9BZD3 368 aaPredicted RBP9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 PCIF1Q9H4Z3 704 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 PCDHB13Q9Y5F0 798 aa9.5□□□□□ -0.89
SMARCAL1-202ENST00000358207 GOLGA8JA6NMD2 632 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 CSDE1O75534 798 aaKnown RBP9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 ALDH18A1P54886 795 aaKnown RBP9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 GJA9P57773 515 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 ODR4Q5SWX8 454 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 C6orf132Q5T0Z8 1188 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 PPP4R4Q6NUP7 873 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 VSIG10LQ86VR7 867 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 C1orf54Q8WWF1 131 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 RFFLQ8WZ73 363 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 TARS2Q9BW92 718 aaKnown RBP9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 FRMD8Q9BZ67 464 aaPredicted RBP9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 MTMR12Q9C0I1 747 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 CXorf21Q9HAI6 301 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 MOCS1Q9NZB8 636 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 PACSIN3Q9UKS6 424 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 ALG6Q9Y672 507 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 NCANO14594 1321 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 KDM3AQ9Y4C1 1321 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 SOWAHBA6NEL2 793 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 SOX1O00570 391 aaPredicted RBP9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 KRT10P13645 584 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 CYP2B6P20813 491 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 BGNP21810 368 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 EPHA3P29320 983 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 CASP4P49662 377 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 CYP2J2P51589 502 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 COPZ1P61923 177 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 POU6F2P78424 691 aaPredicted RBP9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 ADGRE1Q14246 886 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 CCNG2Q16589 344 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 MTERF2Q49AM1 385 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 DCAF17Q5H9S7 520 aaPredicted RBP9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 FAM102BQ5T8I3 360 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 PRR23BQ6ZRT6 265 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 FRA10AC1Q70Z53 315 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 FIBCD1Q8N539 461 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 ZSWIM2Q8NEG5 633 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 NLRP7Q8WX94 980 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 RMDN1Q96DB5 314 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 METTL2AQ96IZ6 378 aaKnown RBP9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 C1orf74Q96LT6 269 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 NACC1Q96RE7 527 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 KLF6Q99612 283 aaPredicted RBP9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 ZNF717Q9BY31 904 aaPredicted RBP9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 NOL6Q9H6R4 1146 aaKnown RBP9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 NANOGQ9H9S0 305 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 CYP4F11Q9HBI6 524 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 ATPIF1Q9UII2 106 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 MYRFQ9Y2G1 1151 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 COL4A3BPQ9Y5P4 624 aa9.49□□□□□ -0.89
SMARCAL1-202ENST00000358207 FAM172BPA6NC97 362 aa9.48□□□□□ -0.89
SMARCAL1-202ENST00000358207 M0QX08 132 aa9.48□□□□□ -0.89
SMARCAL1-202ENST00000358207 MEN1O00255 615 aa9.48□□□□□ -0.89
SMARCAL1-202ENST00000358207 PEX14O75381 377 aa9.48□□□□□ -0.89
SMARCAL1-202ENST00000358207 PIAS1O75925 651 aa9.48□□□□□ -0.89
SMARCAL1-202ENST00000358207 ALDH1A2O94788 518 aa9.48□□□□□ -0.89
SMARCAL1-202ENST00000358207 PROCP04070 461 aa9.48□□□□□ -0.89
SMARCAL1-202ENST00000358207 RRM1P23921 792 aa9.48□□□□□ -0.89
SMARCAL1-202ENST00000358207 CCND2P30279 289 aa9.48□□□□□ -0.89
SMARCAL1-202ENST00000358207 PTGS2P35354 604 aa9.48□□□□□ -0.89
SMARCAL1-202ENST00000358207 POLD2P49005 469 aa9.48□□□□□ -0.89
SMARCAL1-202ENST00000358207 MAPK10P53779 464 aa9.48□□□□□ -0.89
SMARCAL1-202ENST00000358207 PTPN5P54829 565 aa9.48□□□□□ -0.89
SMARCAL1-202ENST00000358207 DLG4P78352 724 aa9.48□□□□□ -0.89
SMARCAL1-202ENST00000358207 ECT2LQ008S8 904 aa9.48□□□□□ -0.89
SMARCAL1-202ENST00000358207 SNTA1Q13424 505 aa9.48□□□□□ -0.89
SMARCAL1-202ENST00000358207 GNA13Q14344 377 aa9.48□□□□□ -0.89
SMARCAL1-202ENST00000358207 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.48□□□□□ -0.89
SMARCAL1-202ENST00000358207 CCDC60Q8IWA6 550 aaPredicted RBP9.48□□□□□ -0.89
SMARCAL1-202ENST00000358207 FIG4Q92562 907 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms