RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 SLC29A2Q14542 456 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 ISLR2Q6UXK2 745 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 TMEM199Q8N511 208 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 ZNF366Q8N895 744 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 PCSK9Q8NBP7 692 aaKnown RBP9.91□□□□□ -0.82
CHD3-202ENST00000358181 REPS1Q96D71 796 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 REEP2Q9BRK0 252 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 RANBP17Q9H2T7 1088 aaKnown RBP9.91□□□□□ -0.82
CHD3-202ENST00000358181 ARMCX1Q9P291 453 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 FAM153AQ9UHL3 310 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 LOC100506127A0A0U1RQW1 187 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 PTGES3LE9PB15 166 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 MAGEB2O15479 319 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.91□□□□□ -0.82
CHD3-202ENST00000358181 BCL2L1Q07817 233 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 POU6F1Q14863 301 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 ZNF605Q86T29 641 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 ZSCAN1Q8NBB4 408 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 FBXO15Q8NCQ5 510 aaPredicted RBP9.91□□□□□ -0.82
CHD3-202ENST00000358181 DDHD1Q8NEL9 900 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 RBM15Q96T37 977 aaKnown RBP eCLIP9.91□□□□□ -0.82
CHD3-202ENST00000358181 PLEKP08567 350 aaPredicted RBP9.91□□□□□ -0.82
CHD3-202ENST00000358181 ECH1Q13011 328 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 CRY2Q49AN0 593 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 SLC39A12Q504Y0 691 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 ZDHHC20Q5W0Z9 365 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 IZUMO2Q6UXV1 221 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 TAS1R3Q7RTX0 852 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 KIRREL3Q8IZU9 778 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 LGMNQ99538 433 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 BRD9Q9H8M2 597 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 HMG20AQ9NP66 347 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 STK39Q9UEW8 545 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 TTC26A0AVF1 554 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 H7C0S8 307 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 GHRP10912 638 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 CHN1P15882 459 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 PTPN5P54829 565 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 DRG2P55039 364 aaKnown RBP9.91□□□□□ -0.82
CHD3-202ENST00000358181 PHF19Q5T6S3 580 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 IRGCQ6NXR0 463 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 MTA3Q9BTC8 594 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 DCUN1D5Q9BTE7 237 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 DEFB129Q9H1M3 183 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 C10orf88Q9H8K7 445 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 LIMD1Q9UGP4 676 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 NUDT5Q9UKK9 219 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 CPSF1Q10570 1443 aaKnown RBP9.9□□□□□ -0.82
CHD3-202ENST00000358181 LGALS16A8MUM7 142 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 PLOD3O60568 738 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 RSL1D1O76021 490 aaKnown RBP9.9□□□□□ -0.82
CHD3-202ENST00000358181 KLHL2O95198 593 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 NTRK1P04629 796 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 ATP5BP06576 529 aaKnown RBP9.9□□□□□ -0.82
CHD3-202ENST00000358181 HTR1BP28222 390 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 BUD31P41223 144 aaPredicted RBP9.9□□□□□ -0.82
CHD3-202ENST00000358181 AKR1D1P51857 326 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 MINDY4Q4G0A6 757 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 POTEAQ6S8J7 498 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 UBE2J2Q8N2K1 259 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 CENPIQ92674 756 aaPredicted RBP9.9□□□□□ -0.82
CHD3-202ENST00000358181 GPAMQ9HCL2 828 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 MTMR4Q9NYA4 1195 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 CLIC5Q9NZA1 410 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 RABGEF1Q9UJ41 708 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 ARL5AQ9Y689 179 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 SNCAIPQ9Y6H5 919 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 UBE2QL1A1L167 161 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 CCDC154A6NI56 674 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 CCDC188H7C350 402 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 CAMTA2O94983 1202 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 SUPT20HL2P0C7V6 817 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 FDPSP14324 419 aaKnown RBP9.9□□□□□ -0.82
CHD3-202ENST00000358181 EPHX2P34913 555 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 SNRNP35Q16560 246 aaKnown RBP9.9□□□□□ -0.82
CHD3-202ENST00000358181 TDRD5Q8NAT2 981 aaKnown RBP9.9□□□□□ -0.82
CHD3-202ENST00000358181 TAAR1Q96RJ0 339 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 RHPN2P1A8MT19 583 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 GNRH1P01148 92 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 GMFBP60983 142 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 ATG4CQ96DT6 458 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 IRX2Q9BZI1 471 aaPredicted RBP9.9□□□□□ -0.82
CHD3-202ENST00000358181 CDH9Q9ULB4 789 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 AAR2Q9Y312 384 aaKnown RBP9.9□□□□□ -0.82
CHD3-202ENST00000358181 ZNF780BQ9Y6R6 833 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 ZNF609O15014 1411 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 CDC42BPAQ5VT25 1732 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 PNMA8CA0A1B0GUJ8 204 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 PCP4L1A6NKN8 68 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 RGS14O43566 566 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 ERAL1O75616 437 aaKnown RBP9.9□□□□□ -0.82
CHD3-202ENST00000358181 TRAPPC6AO75865 159 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 IL33O95760 270 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 LRPAP1P30533 357 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 ARFIP1P53367 373 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 PPIL2Q13356 520 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 SLC30A10Q6XR72 485 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 LIX1Q8N485 282 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 DNAJB3Q8WWF6 145 aa9.9□□□□□ -0.82
CHD3-202ENST00000358181 CHID1Q9BWS9 393 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms