RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 STILQ15468 1287 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 ZNF792Q3KQV3 632 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 UNC13DQ70J99 1090 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 LRRN4CLQ8ND94 238 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 HMGB4Q8WW32 186 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 NOP53Q9NZM5 478 aaKnown RBP5.89□□□□□ -1.47
BRCA1-203ENST00000357654 ARMCX1Q9P291 453 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 TUBGCP4Q9UGJ1 667 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 SUPT6HQ7KZ85 1726 aaKnown RBP5.89□□□□□ -1.47
BRCA1-203ENST00000357654 MDFIC2A0A1B0GVS7 189 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 MANSC4A6NHS7 340 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-203ENST00000357654 PEX12O00623 359 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 NDUFA10O95299 355 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 HNF1BP35680 557 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 HSPA14Q0VDF9 509 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 TOP3AQ13472 1001 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-203ENST00000357654 MADCAM1Q13477 382 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 CRY1Q16526 586 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 ZC2HC1CQ53FD0 456 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-203ENST00000357654 MLIPQ5VWP3 458 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 SLC2A7Q6PXP3 512 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 METTL7BQ6UX53 244 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 C3orf62Q6ZUJ4 267 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 PHYKPLQ8IUZ5 450 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 SLC22A15Q8IZD6 547 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 PARP8Q8N3A8 854 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 FNDC5Q8NAU1 212 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 C11orf65Q8NCR3 313 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 CATSPER1Q8NEC5 780 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 LRRC20Q8TCA0 184 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 CKAP2Q8WWK9 683 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 COQ8BQ96D53 544 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 MFSD3Q96ES6 412 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 NECTIN3Q9NQS3 549 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 ARL15Q9NXU5 204 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 NKIRAS2Q9NYR9 191 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 KANSL3Q9P2N6 904 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 TAF6LQ9Y6J9 622 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 WASF2Q9Y6W5 498 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 COL15A1P39059 1388 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 SLC28A1O00337 649 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 ATP9AO75110 1047 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 CCNDBP1O95273 360 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 MCAMP43121 646 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 MAPK8P45983 427 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 CDH15P55291 814 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 SNRNP35Q16560 246 aaKnown RBP5.88□□□□□ -1.47
BRCA1-203ENST00000357654 PFKFB3Q16875 520 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-203ENST00000357654 INAVAQ3KP66 663 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 TKFCQ3LXA3 575 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 DAB2IPQ5VWQ8 1189 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 RETSATQ6NUM9 610 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 KANSL1Q7Z3B3 1105 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 SLFN11Q7Z7L1 901 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 ZNF589Q86UQ0 364 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-203ENST00000357654 ENKURQ8TC29 256 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 FRS2Q8WU20 508 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 PRCCQ92733 491 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-203ENST00000357654 EMID1Q96A84 441 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-203ENST00000357654 CDK5RAP1Q96SZ6 601 aaKnown RBP5.88□□□□□ -1.47
BRCA1-203ENST00000357654 DPYSL5Q9BPU6 564 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 TAPBPLQ9BX59 468 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 GPAMQ9HCL2 828 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 SEMA3GQ9NS98 782 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 PRMT7Q9NVM4 692 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-203ENST00000357654 USP20Q9Y2K6 914 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 MLH3Q9UHC1 1453 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 A0A1W2PP64 1363 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 WASHC1A8K0Z3 465 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 WASH3PC4AMC7 463 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 CES2O00748 559 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 PGK1P00558 417 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 CTPS1P17812 591 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 ALOX12P18054 663 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 SLC6A9P48067 706 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 GEMIN4P57678 1058 aaKnown RBP5.88□□□□□ -1.47
BRCA1-203ENST00000357654 ABATP80404 500 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 DPCR1Q3MIW9 517 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 C2orf27AQ580R0 203 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 ATAT1Q5SQI0 421 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 LIN54Q6MZP7 749 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 TTI2Q6NXR4 508 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 WASH2PQ6VEQ5 465 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 SRFBP1Q8NEF9 429 aaKnown RBP5.88□□□□□ -1.47
BRCA1-203ENST00000357654 RMND5BQ96G75 393 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-203ENST00000357654 MTMR12Q9C0I1 747 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 TBC1D23Q9NUY8 699 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 PTGFRNQ9P2B2 879 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 DKK3Q9UBP4 350 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 TBC1D24Q9ULP9 559 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 MRPS17Q9Y2R5 130 aaKnown RBP5.88□□□□□ -1.47
BRCA1-203ENST00000357654 SF3B1O75533 1304 aaKnown RBP eCLIP5.88□□□□□ -1.471e-6■■■■■ 112.6
BRCA1-203ENST00000357654 RAD51BO15315 384 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 NOL4O94818 638 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 HLA-DRAP01903 254 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 SLC35G4P0C7Q5 338 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 TUBP50607 506 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 ARFIP1P53367 373 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 PCDH1Q08174 1060 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 RUNX2Q13950 521 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms