RNA–Protein interactions for RNA: ENST00000357490.6

COPS7B-202, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-202ENST00000357490 KIAA1524Q8TCG1 905 aa16.48■□□□□ 0.23
COPS7B-202ENST00000357490 GAB3Q8WWW8 586 aa16.48■□□□□ 0.23
COPS7B-202ENST00000357490 RAPGEF5Q92565 580 aa16.48■□□□□ 0.23
COPS7B-202ENST00000357490 TSC1Q92574 1164 aa16.48■□□□□ 0.23
COPS7B-202ENST00000357490 TTC17Q96AE7 1141 aa16.48■□□□□ 0.23
COPS7B-202ENST00000357490 CALR3Q96L12 384 aaKnown RBP16.48■□□□□ 0.23
COPS7B-202ENST00000357490 PSMB7Q99436 277 aa16.48■□□□□ 0.23
COPS7B-202ENST00000357490 RTKNQ9BST9 563 aa16.48■□□□□ 0.23
COPS7B-202ENST00000357490 TSGA10Q9BZW7 698 aa16.48■□□□□ 0.23
COPS7B-202ENST00000357490 MUC3BQ9H195 1237 aa16.48■□□□□ 0.23
COPS7B-202ENST00000357490 RETREG1Q9H6L5 497 aa16.48■□□□□ 0.23
COPS7B-202ENST00000357490 NOL6Q9H6R4 1146 aaKnown RBP16.48■□□□□ 0.23
COPS7B-202ENST00000357490 LZTFL1Q9NQ48 299 aa16.48■□□□□ 0.23
COPS7B-202ENST00000357490 MYO18AQ92614 2054 aaKnown RBP16.48■□□□□ 0.23
COPS7B-202ENST00000357490 NUP205Q92621 2012 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 ILVBLA1L0T0 632 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 WASH3PC4AMC7 463 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 H3BRJ5 948 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 FGF10O15520 208 aaPredicted RBP16.47■□□□□ 0.23
COPS7B-202ENST00000357490 KRT86O43790 486 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 ADAM23O75077 832 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 PALMO75781 387 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 RPP40O75818 363 aaKnown RBP16.47■□□□□ 0.23
COPS7B-202ENST00000357490 HNRNPLP14866 589 aaKnown RBP eCLIP16.47■□□□□ 0.23
COPS7B-202ENST00000357490 ERCC2P18074 760 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 KDELR1P24390 212 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 WASP42768 502 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 ZNF135P52742 658 aaPredicted RBP16.47■□□□□ 0.23
COPS7B-202ENST00000357490 GNA12Q03113 381 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 DPYSL3Q14195 570 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 CSRP2Q16527 193 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 IFI16Q16666 785 aaKnown RBP16.47■□□□□ 0.23
COPS7B-202ENST00000357490 PTPRNQ16849 979 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 LRRC38Q5VT99 294 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 SYT13Q7L8C5 426 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 TXNDC5Q8NBS9 432 aaKnown RBP16.47■□□□□ 0.23
COPS7B-202ENST00000357490 KCNV2Q8TDN2 545 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 UCMAQ8WVF2 138 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 LOXL4Q96JB6 756 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 CSPG4P5Q96PW8 444 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 CALN1Q9BXU9 219 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 SEMA4GQ9NTN9 838 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 THAP10Q9P2Z0 257 aaPredicted RBP16.47■□□□□ 0.23
COPS7B-202ENST00000357490 VPS28Q9UK41 221 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 CAPN6Q9Y6Q1 641 aa16.47■□□□□ 0.23
COPS7B-202ENST00000357490 SGK1O00141 431 aa16.46■□□□□ 0.23
COPS7B-202ENST00000357490 SNAP91O60641 907 aa16.46■□□□□ 0.23
COPS7B-202ENST00000357490 ATP5BP06576 529 aaKnown RBP16.46■□□□□ 0.23
COPS7B-202ENST00000357490 DLDP09622 509 aaKnown RBP16.46■□□□□ 0.23
COPS7B-202ENST00000357490 ACVRL1P37023 503 aa16.46■□□□□ 0.23
COPS7B-202ENST00000357490 MARCKSL1P49006 195 aa16.46■□□□□ 0.23
COPS7B-202ENST00000357490 ZNF234Q14588 700 aa16.46■□□□□ 0.23
COPS7B-202ENST00000357490 PDK2Q15119 407 aa16.46■□□□□ 0.23
COPS7B-202ENST00000357490 ZNF783Q6ZMS7 281 aa16.46■□□□□ 0.23
COPS7B-202ENST00000357490 ZNF662Q6ZS27 426 aa16.46■□□□□ 0.23
COPS7B-202ENST00000357490 CHPFQ8IZ52 775 aa16.46■□□□□ 0.23
COPS7B-202ENST00000357490 RNF10Q8N5U6 811 aaKnown RBP16.46■□□□□ 0.23
COPS7B-202ENST00000357490 NETO1Q8TDF5 533 aa16.46■□□□□ 0.23
COPS7B-202ENST00000357490 KRT35Q92764 455 aa16.46■□□□□ 0.23
COPS7B-202ENST00000357490 RPL10LQ96L21 214 aaKnown RBP16.46■□□□□ 0.23
COPS7B-202ENST00000357490 SPON2Q9BUD6 331 aa16.46■□□□□ 0.23
COPS7B-202ENST00000357490 ETNK2Q9NVF9 386 aa16.46■□□□□ 0.23
COPS7B-202ENST00000357490 CACNA2D2Q9NY47 1150 aa16.46■□□□□ 0.23
COPS7B-202ENST00000357490 MFHAS1Q9Y4C4 1052 aa16.46■□□□□ 0.23
COPS7B-202ENST00000357490 THADAQ6YHU6 1953 aa16.46■□□□□ 0.22
COPS7B-202ENST00000357490 MED19A0JLT2 244 aaPredicted RBP16.45■□□□□ 0.22
COPS7B-202ENST00000357490 LRRD1A4D1F6 860 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 C3orf70A6NLC5 250 aaPredicted RBP16.45■□□□□ 0.22
COPS7B-202ENST00000357490 DCLK1O15075 740 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 PSTPIP1O43586 416 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 RAMP2O60895 175 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 APBB3O95704 486 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 GLDCP23378 1020 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 NTSR1P30989 418 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 IL12RB1P42701 662 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 PXNP49023 591 aaPredicted RBP16.45■□□□□ 0.22
COPS7B-202ENST00000357490 ECT2LQ008S8 904 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 POLD3Q15054 466 aaPredicted RBP16.45■□□□□ 0.22
COPS7B-202ENST00000357490 IL31Q6EBC2 164 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 PRR23CQ6ZRP0 262 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 NT5DC3Q86UY8 548 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 UMODL1-AS1Q8N2C9 162 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 NPWQ8N729 165 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 NETO2Q8NC67 525 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 ARHGEF2Q92974 986 aaKnown RBP16.45■□□□□ 0.22
COPS7B-202ENST00000357490 RNF25Q96BH1 459 aaPredicted RBP16.45■□□□□ 0.22
COPS7B-202ENST00000357490 ERLEC1Q96DZ1 483 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 MYO19Q96H55 970 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 CELF6Q96J87 481 aaKnown RBP16.45■□□□□ 0.22
COPS7B-202ENST00000357490 MRGPRX3Q96LB0 322 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 KLC2Q9H0B6 622 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 MAGEH1Q9H213 219 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 DDX56Q9NY93 547 aaKnown RBP16.45■□□□□ 0.22
COPS7B-202ENST00000357490 RCOR3Q9P2K3 495 aaPredicted RBP16.45■□□□□ 0.22
COPS7B-202ENST00000357490 MMP17Q9ULZ9 603 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 PLA2G4CQ9UP65 541 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 ERVW-1Q9UQF0 538 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.45■□□□□ 0.22
COPS7B-202ENST00000357490 STON1Q9Y6Q2 735 aa16.45■□□□□ 0.22
COPS7B-202ENST00000357490 CHD5Q8TDI0 1954 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms