RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 KCNH1O95259 989 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 CYP2A6P11509 494 aaPredicted RBP16.3■□□□□ 0.2
RXRA-201ENST00000356384 YBX3P16989 372 aaKnown RBP eCLIP16.3■□□□□ 0.22e-6■□□□□ 8.7
RXRA-201ENST00000356384 TKTP29401 623 aaKnown RBP16.3■□□□□ 0.2
RXRA-201ENST00000356384 MZT2AQ6P582 158 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 COL26A1Q96A83 441 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 TRIT1Q9H3H1 467 aaKnown RBP16.3■□□□□ 0.2
RXRA-201ENST00000356384 ANAPC2Q9UJX6 822 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 COG5Q9UP83 839 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 IQCMA0A1B0GVH7 501 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 ZNF37AP17032 561 aaPredicted RBP16.3■□□□□ 0.2
RXRA-201ENST00000356384 COPZ1P61923 177 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 TMC3Q7Z5M5 1100 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 ARMC8Q8IUR7 673 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 TBCBQ99426 244 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 USP12O75317 370 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 PCSK9Q8NBP7 692 aaKnown RBP16.3■□□□□ 0.2
RXRA-201ENST00000356384 MAGEE2Q8TD90 523 aaPredicted RBP16.3■□□□□ 0.2
RXRA-201ENST00000356384 ANKRD27Q96NW4 1050 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 C15orf38-AP3S2A0A0A6YYH1 394 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 KPNA3O00505 521 aaPredicted RBP16.3■□□□□ 0.2
RXRA-201ENST00000356384 PIGNO95427 931 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 NTRK1P04629 796 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 NTSP30990 170 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 ELAVL2Q12926 359 aaKnown RBP16.3■□□□□ 0.2
RXRA-201ENST00000356384 MZT2BQ6NZ67 158 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 ARPINQ7Z6K5 226 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 C4orf19Q8IY42 314 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 STARD8Q92502 1023 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 THG1LQ9NWX6 298 aaKnown RBP16.3■□□□□ 0.2
RXRA-201ENST00000356384 GAKO14976 1311 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 KLRC2P26717 231 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 ZNF268Q14587 947 aaPredicted RBP16.3■□□□□ 0.2
RXRA-201ENST00000356384 FAM187BQ17R55 369 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 C16orf46Q6P387 395 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 ADHFE1Q8IWW8 467 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 DEFB106AQ8N104 65 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 BPIFB6Q8NFQ5 453 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 MTMR8Q96EF0 704 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 SMARCD1Q96GM5 515 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 SERPINB11Q96P15 392 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 MROH8Q9H579 483 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 SPG21Q9NZD8 308 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 KLQ9UEF7 1012 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 FAM50BQ9Y247 325 aa16.3■□□□□ 0.2
RXRA-201ENST00000356384 POLR1AO95602 1720 aaPredicted RBP16.29■□□□□ 0.2
RXRA-201ENST00000356384 CCDC189A1A4V9 331 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 ANKDD1BA6NHY2 528 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 RARAP10276 462 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 HNMTP50135 292 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 TIMM50Q3ZCQ8 353 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 SETMARQ53H47 684 aaPredicted RBP16.29■□□□□ 0.2
RXRA-201ENST00000356384 FAM171A1Q5VUB5 890 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 ARHGAP22Q7Z5H3 698 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 AGBL3Q8NEM8 1001 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 SPATA20Q8TB22 786 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 EEF1AKMT1Q8WVE0 214 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 MARK4Q96L34 752 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 A0A087X1B8 175 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 HIST1H2ABP04908 130 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 CCNA2P20248 432 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 NR2C2P49116 596 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 BACE1P56817 501 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 FNDC3BQ53EP0 1204 aaKnown RBP16.29■□□□□ 0.2
RXRA-201ENST00000356384 HIST3H2AQ7L7L0 130 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 TRAPPC5Q8IUR0 188 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 HIST1H2ACQ93077 130 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 DNAJC1Q96KC8 554 aaKnown RBP16.29■□□□□ 0.2
RXRA-201ENST00000356384 DNPEPQ9ULA0 475 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.29■□□□□ 0.2
RXRA-201ENST00000356384 IDH3BO43837 385 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 FAM153BP0C7A2 387 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 ZNF844Q08AG5 666 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 FAM153CQ494X1 144 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 EIF3MQ7L2H7 374 aaKnown RBP16.29■□□□□ 0.2
RXRA-201ENST00000356384 COLGALT2Q8IYK4 626 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 DNAJB3Q8WWF6 145 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 CAPSLQ8WWF8 208 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 TMEM138Q9NPI0 162 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.29■□□□□ 0.2
RXRA-201ENST00000356384 RRN3Q9NYV6 651 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 HMGB3O15347 200 aaKnown RBP16.29■□□□□ 0.2
RXRA-201ENST00000356384 ADRA1DP25100 572 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 ABCG1P45844 678 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 CDC42P60953 191 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 LGALS3BPQ08380 585 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 SPIRE1Q08AE8 756 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 STYK1Q6J9G0 422 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 KCNT2Q6UVM3 1135 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 SCAIQ8N9R8 606 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 ARRDC4Q8NCT1 418 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 STK32AQ8WU08 396 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 PDCD10Q9BUL8 212 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 COMMD9Q9P000 198 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 C15orf41Q9Y2V0 281 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 ARIH1Q9Y4X5 557 aaPredicted RBP16.29■□□□□ 0.2
RXRA-201ENST00000356384 SPATA31A1Q5TZJ5 1347 aa16.29■□□□□ 0.2
RXRA-201ENST00000356384 PIK3CGP48736 1102 aa16.28■□□□□ 0.2
RXRA-201ENST00000356384 CDK7P50613 346 aa16.28■□□□□ 0.2
RXRA-201ENST00000356384 IL2P60568 153 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms