RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 SIX2Q9NPC8 291 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 DYRK4Q9NR20 520 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 RALYQ9UKM9 306 aaKnown RBP10.95□□□□□ -0.66
CAPN3-204ENST00000356316 PTPRBP23467 1997 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 CHD6Q8TD26 2715 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 NYNRINQ9P2P1 1898 aaKnown RBP10.95□□□□□ -0.66
CAPN3-204ENST00000356316 DSPP15924 2871 aaKnown RBP10.95□□□□□ -0.66
CAPN3-204ENST00000356316 SNPHO15079 494 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 ALOX15BO15296 676 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 RTN2O75298 545 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 TPM2P07951 284 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 RHOCP08134 193 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 CDK4P11802 303 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 CYP11B1P15538 503 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 OR1E1P30953 314 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 MAT2AP31153 395 aaKnown RBP10.94□□□□□ -0.66
CAPN3-204ENST00000356316 CXCR3P49682 368 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 CNTN1Q12860 1018 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 DRAP1Q14919 205 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-204ENST00000356316 SLC25A52Q3SY17 297 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 PTPN20Q4JDL3 420 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 SETMARQ53H47 684 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-204ENST00000356316 FAM102AQ5T9C2 384 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-204ENST00000356316 NAPEPLDQ6IQ20 393 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 GATAD2AQ86YP4 633 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 SH2D3CQ8N5H7 860 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 MFSD2AQ8NA29 543 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 PIP4K2CQ8TBX8 421 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 FRS2Q8WU20 508 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 C1orf74Q96LT6 269 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 NPY6RQ99463 290 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 CLSTN2Q9H4D0 955 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 ERVMER34-1Q9H9K5 563 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 EBF2Q9HAK2 575 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 PIGVQ9NUD9 493 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 TOR4AQ9NXH8 423 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 PPM1HQ9ULR3 514 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 LHX6Q9UPM6 363 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 DMTF1Q9Y222 760 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 TBC1D30Q9Y2I9 924 aa10.94□□□□□ -0.66
CAPN3-204ENST00000356316 TP53BP1Q12888 1972 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-204ENST00000356316 PRAMEF26H0Y7S4 382 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 PLK4O00444 970 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 PLRG1O43660 514 aaKnown RBP10.93□□□□□ -0.66
CAPN3-204ENST00000356316 SRGAP2O75044 1071 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 ADCY5O95622 1261 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 WNT1P04628 370 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 C1SP09871 688 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 PNMA6AP0CW24 399 aaPredicted RBP10.93□□□□□ -0.66
CAPN3-204ENST00000356316 DRD3P35462 400 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 GGCXP38435 758 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 RECQLP46063 649 aaPredicted RBP10.93□□□□□ -0.66
CAPN3-204ENST00000356316 GABRB2P47870 512 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 OVGP1Q12889 678 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 POM121L1PQ3SYA9 428 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 C5orf22Q49AR2 442 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 CT47A1Q5JQC4 288 aaPredicted RBP10.93□□□□□ -0.66
CAPN3-204ENST00000356316 C6orf118Q5T5N4 469 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 KLHDC7AQ5VTJ3 777 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 TAF3Q5VWG9 929 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 Q6ZVU0 165 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 C14orf80Q86SX3 495 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 SETD3Q86TU7 594 aaPredicted RBP10.93□□□□□ -0.66
CAPN3-204ENST00000356316 IQCHQ86VS3 1027 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 EID2Q8N6I1 236 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 ALG14Q96F25 216 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 PGAP3Q96FM1 320 aaPredicted RBP10.93□□□□□ -0.66
CAPN3-204ENST00000356316 CNDP2Q96KP4 475 aaKnown RBP10.93□□□□□ -0.66
CAPN3-204ENST00000356316 ARHGEF38Q9NXL2 777 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 AJAP1Q9UKB5 411 aaPredicted RBP10.93□□□□□ -0.66
CAPN3-204ENST00000356316 SARDHQ9UL12 918 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 PLXNB3Q9ULL4 1909 aa10.93□□□□□ -0.66
CAPN3-204ENST00000356316 A0A1W2PR77 199 aa10.92□□□□□ -0.66
CAPN3-204ENST00000356316 TRABD2BA6NFA1 517 aa10.92□□□□□ -0.66
CAPN3-204ENST00000356316 GOLGA8SH3BPF8 625 aa10.92□□□□□ -0.66
CAPN3-204ENST00000356316 TAF4O00268 1085 aa10.92□□□□□ -0.66
CAPN3-204ENST00000356316 KPNA3O00505 521 aaPredicted RBP10.92□□□□□ -0.66
CAPN3-204ENST00000356316 ENC1O14682 589 aa10.92□□□□□ -0.66
CAPN3-204ENST00000356316 WNT9AO14904 365 aa10.92□□□□□ -0.66
CAPN3-204ENST00000356316 LATO43561 262 aa10.92□□□□□ -0.66
CAPN3-204ENST00000356316 RNGTTO60942 597 aaKnown RBP10.92□□□□□ -0.66
CAPN3-204ENST00000356316 CNTN5O94779 1100 aa10.92□□□□□ -0.66
CAPN3-204ENST00000356316 LSM8O95777 96 aaKnown RBP10.92□□□□□ -0.66
CAPN3-204ENST00000356316 PRNPP04156 253 aa10.92□□□□□ -0.66
CAPN3-204ENST00000356316 SRCP12931 536 aa10.92□□□□□ -0.66
CAPN3-204ENST00000356316 JUPP14923 745 aa10.92□□□□□ -0.66
CAPN3-204ENST00000356316 EEF1GP26641 437 aaKnown RBP10.92□□□□□ -0.66
CAPN3-204ENST00000356316 CHRNA3P32297 505 aa10.92□□□□□ -0.66
CAPN3-204ENST00000356316 CDH5P33151 784 aaPredicted RBP10.92□□□□□ -0.66
CAPN3-204ENST00000356316 HNF1BP35680 557 aa10.92□□□□□ -0.66
CAPN3-204ENST00000356316 SCNN1AP37088 669 aa10.92□□□□□ -0.66
CAPN3-204ENST00000356316 IRAK1P51617 712 aa10.92□□□□□ -0.66
CAPN3-204ENST00000356316 NXPH1P58417 271 aa10.92□□□□□ -0.66
CAPN3-204ENST00000356316 DPCR1Q3MIW9 517 aa10.92□□□□□ -0.66
CAPN3-204ENST00000356316 ARL13BQ3SXY8 428 aa10.92□□□□□ -0.66
CAPN3-204ENST00000356316 HS1BP3Q53T59 392 aa10.92□□□□□ -0.66
CAPN3-204ENST00000356316 RETSATQ6NUM9 610 aa10.92□□□□□ -0.66
CAPN3-204ENST00000356316 NEK5Q6P3R8 708 aa10.92□□□□□ -0.66
CAPN3-204ENST00000356316 DHRS13Q6UX07 377 aa10.92□□□□□ -0.66
CAPN3-204ENST00000356316 TMPRSS12Q86WS5 348 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms