RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 CDH2P19022 906 aaPredicted RBP13.86□□□□□ -0.19
TRIM4-203ENST00000355947 RPL14P50914 215 aaKnown RBP13.86□□□□□ -0.19
TRIM4-203ENST00000355947 NDST2P52849 883 aa13.86□□□□□ -0.19
TRIM4-203ENST00000355947 PDK2Q15119 407 aa13.86□□□□□ -0.19
TRIM4-203ENST00000355947 HERC6Q8IVU3 1022 aa13.86□□□□□ -0.19
TRIM4-203ENST00000355947 NCSTNQ92542 709 aa13.86□□□□□ -0.19
TRIM4-203ENST00000355947 RNF34Q969K3 372 aa13.86□□□□□ -0.19
TRIM4-203ENST00000355947 KCTD15Q96SI1 283 aaPredicted RBP13.86□□□□□ -0.19
TRIM4-203ENST00000355947 QTRT2Q9H974 415 aaKnown RBP13.86□□□□□ -0.19
TRIM4-203ENST00000355947 PDLIM7Q9NR12 457 aa13.86□□□□□ -0.19
TRIM4-203ENST00000355947 DNAJC28Q9NX36 388 aa13.86□□□□□ -0.19
TRIM4-203ENST00000355947 CPSF3Q9UKF6 684 aaKnown RBP13.86□□□□□ -0.19
TRIM4-203ENST00000355947 MYRFQ9Y2G1 1151 aa13.86□□□□□ -0.19
TRIM4-203ENST00000355947 PDE4DIPQ5VU43 2346 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 A0A087WZ62 844 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 E7ENX8 843 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 PPEF2O14830 753 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 HDAC3O15379 428 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 PSME3P61289 254 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 HSDL1Q3SXM5 330 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 ZNF554Q86TJ5 538 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 MCRS1Q96EZ8 462 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 TBCBQ99426 244 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 FDXACB1Q9BRP7 624 aaPredicted RBP13.85□□□□□ -0.19
TRIM4-203ENST00000355947 DPEP3Q9H4B8 488 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 ZDHHC7Q9NXF8 308 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 XPR1Q9UBH6 696 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 GIMAP2Q9UG22 337 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 VANGL2Q9ULK5 521 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 CNTN6Q9UQ52 1028 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 GNAO1P09471 354 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 VDRP11473 427 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 SLC12A1Q13621 1099 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 TMEM132DQ14C87 1099 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 FUT11Q495W5 492 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 ZNF354CQ86Y25 554 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 MARVELD2Q8N4S9 558 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.85□□□□□ -0.19
TRIM4-203ENST00000355947 RIN3Q8TB24 985 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 FNIP1Q8TF40 1166 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 LPAR1Q92633 364 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 MRPL45Q9BRJ2 306 aaKnown RBP13.85□□□□□ -0.19
TRIM4-203ENST00000355947 PCDHB12Q9Y5F1 795 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 SNX10Q9Y5X0 201 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 NUP205Q92621 2012 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 A0A0A0MRY4 1105 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 CILPO75339 1184 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 PGAM1P18669 254 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 CXCR3P49682 368 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 GRM3Q14832 879 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 ZIK1Q3SY52 487 aaPredicted RBP13.85□□□□□ -0.19
TRIM4-203ENST00000355947 FAM160B1Q5W0V3 765 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 EMID1Q96A84 441 aaPredicted RBP13.85□□□□□ -0.19
TRIM4-203ENST00000355947 VPS39Q96JC1 886 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 SPATA13Q96N96 652 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 FAM49AQ9H0Q0 323 aaPredicted RBP13.85□□□□□ -0.19
TRIM4-203ENST00000355947 PNPLA8Q9NP80 782 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 KLK14Q9P0G3 267 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 WARS2Q9UGM6 360 aaKnown RBP13.85□□□□□ -0.19
TRIM4-203ENST00000355947 TRIP11Q15643 1979 aa13.85□□□□□ -0.19
TRIM4-203ENST00000355947 CNTNAP1P78357 1384 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 DOCK5Q9H7D0 1870 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 WNK3Q9BYP7 1800 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 A0A1W2PPW3 197 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 PPARGP37231 505 aaPredicted RBP13.84□□□□□ -0.19
TRIM4-203ENST00000355947 EFNA5P52803 228 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 CSHL1Q14406 222 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 PPP1R3AQ16821 1122 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 MGAT5BQ3V5L5 792 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 OTUD3Q5T2D3 398 aaPredicted RBP13.84□□□□□ -0.19
TRIM4-203ENST00000355947 EPGNQ6UW88 154 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 DLK2Q6UY11 383 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 ADGRG6Q86SQ4 1221 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 KCNMB4Q86W47 210 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 RDM1Q8NG50 284 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 DDI1Q8WTU0 396 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 SIK2Q9H0K1 926 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 MRPL46Q9H2W6 279 aaKnown RBP13.84□□□□□ -0.19
TRIM4-203ENST00000355947 TSR3Q9UJK0 312 aaKnown RBP13.84□□□□□ -0.19
TRIM4-203ENST00000355947 FNDC3AQ9Y2H6 1198 aaKnown RBP13.84□□□□□ -0.19
TRIM4-203ENST00000355947 C1orf232A0A0U1RR37 186 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 NOL3O60936 208 aaKnown RBP13.84□□□□□ -0.19
TRIM4-203ENST00000355947 ACAT1P24752 427 aaKnown RBP13.84□□□□□ -0.19
TRIM4-203ENST00000355947 AP3M2P53677 418 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 TPD52P55327 224 aaPredicted RBP13.84□□□□□ -0.19
TRIM4-203ENST00000355947 TRAF2Q12933 501 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 BNIP3Q12983 259 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 FAM91A1Q658Y4 838 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 TTC30AQ86WT1 665 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 NT5DC4Q86YG4 428 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 NIM1KQ8IY84 436 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 CATSPER1Q8NEC5 780 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 LRRC39Q96DD0 335 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 ELMO2Q96JJ3 720 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 CCDC28BQ9BUN5 200 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 TEX13BQ9BXU2 312 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 FAM96AQ9H5X1 160 aa13.84□□□□□ -0.19
TRIM4-203ENST00000355947 TRPC5Q9UL62 973 aaPredicted RBP13.84□□□□□ -0.19
TRIM4-203ENST00000355947 CENPFP49454 3210 aa13.83□□□□□ -0.19
TRIM4-203ENST00000355947 BCLAF3A2AJT9 711 aaKnown RBP13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms