RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 C2orf71A6NGG8 1288 aa23.31■■□□□ 1.32
SCAMP3-202ENST00000355379 ANXA9O76027 345 aa23.31■■□□□ 1.32
SCAMP3-202ENST00000355379 PEX11BO96011 259 aa23.31■■□□□ 1.32
SCAMP3-202ENST00000355379 KLKB1P03952 638 aa23.31■■□□□ 1.32
SCAMP3-202ENST00000355379 C8AP07357 584 aa23.31■■□□□ 1.32
SCAMP3-202ENST00000355379 MBL2P11226 248 aaPredicted RBP23.31■■□□□ 1.32
SCAMP3-202ENST00000355379 CDH4P55283 916 aa23.31■■□□□ 1.32
SCAMP3-202ENST00000355379 GNGT1P63211 74 aa23.31■■□□□ 1.32
SCAMP3-202ENST00000355379 IL10RBQ08334 325 aa23.31■■□□□ 1.32
SCAMP3-202ENST00000355379 POLD3Q15054 466 aaPredicted RBP23.31■■□□□ 1.32
SCAMP3-202ENST00000355379 UNC5AQ6ZN44 842 aa23.31■■□□□ 1.32
SCAMP3-202ENST00000355379 TMC8Q8IU68 726 aa23.31■■□□□ 1.32
SCAMP3-202ENST00000355379 ELMOD1Q8N336 334 aa23.31■■□□□ 1.32
SCAMP3-202ENST00000355379 MPP5Q8N3R9 675 aa23.31■■□□□ 1.32
SCAMP3-202ENST00000355379 GSDMBQ8TAX9 411 aa23.31■■□□□ 1.32
SCAMP3-202ENST00000355379 USP33Q8TEY7 942 aa23.31■■□□□ 1.32
SCAMP3-202ENST00000355379 MYEOVQ96EZ4 313 aa23.31■■□□□ 1.32
SCAMP3-202ENST00000355379 ALG13Q9NP73 1137 aaKnown RBP23.31■■□□□ 1.32
SCAMP3-202ENST00000355379 RBM22Q9NW64 420 aaKnown RBP eCLIP23.31■■□□□ 1.32
SCAMP3-202ENST00000355379 MAD1L1Q9Y6D9 718 aa23.31■■□□□ 1.32
SCAMP3-202ENST00000355379 LINC01553A4QN01 128 aa23.3■■□□□ 1.32
SCAMP3-202ENST00000355379 GLUD1P00367 558 aa23.3■■□□□ 1.32
SCAMP3-202ENST00000355379 C1QAP02745 245 aa23.3■■□□□ 1.32
SCAMP3-202ENST00000355379 RB1P06400 928 aa23.3■■□□□ 1.32
SCAMP3-202ENST00000355379 PFKLP17858 780 aa23.3■■□□□ 1.32
SCAMP3-202ENST00000355379 OR1E1P30953 314 aa23.3■■□□□ 1.32
SCAMP3-202ENST00000355379 MSH2P43246 934 aa23.3■■□□□ 1.32
SCAMP3-202ENST00000355379 RENBPP51606 427 aa23.3■■□□□ 1.32
SCAMP3-202ENST00000355379 TMED2Q15363 201 aa23.3■■□□□ 1.32
SCAMP3-202ENST00000355379 ADGRF1Q5T601 910 aa23.3■■□□□ 1.32
SCAMP3-202ENST00000355379 CHST9Q7L1S5 443 aa23.3■■□□□ 1.32
SCAMP3-202ENST00000355379 LINC00523Q86TU6 105 aa23.3■■□□□ 1.32
SCAMP3-202ENST00000355379 TEX26Q8N6G2 289 aa23.3■■□□□ 1.32
SCAMP3-202ENST00000355379 POF1BQ8WVV4 589 aa23.3■■□□□ 1.32
SCAMP3-202ENST00000355379 CENPTQ96BT3 561 aa23.3■■□□□ 1.32
SCAMP3-202ENST00000355379 ZFRQ96KR1 1074 aaKnown RBP23.3■■□□□ 1.32
SCAMP3-202ENST00000355379 PAFAH2Q99487 392 aa23.3■■□□□ 1.32
SCAMP3-202ENST00000355379 SP110Q9HB58 689 aa23.3■■□□□ 1.32
SCAMP3-202ENST00000355379 SENP1Q9P0U3 644 aa23.3■■□□□ 1.32
SCAMP3-202ENST00000355379 TBK1Q9UHD2 729 aa23.3■■□□□ 1.32
SCAMP3-202ENST00000355379 SRRM3A6NNA2 597 aaPredicted RBP23.29■■□□□ 1.32
SCAMP3-202ENST00000355379 MGAT1P26572 445 aa23.29■■□□□ 1.32
SCAMP3-202ENST00000355379 NPY2RP49146 381 aa23.29■■□□□ 1.32
SCAMP3-202ENST00000355379 GEMP55040 296 aa23.29■■□□□ 1.32
SCAMP3-202ENST00000355379 SERINC3Q13530 473 aa23.29■■□□□ 1.32
SCAMP3-202ENST00000355379 SPARCL1Q14515 664 aa23.29■■□□□ 1.32
SCAMP3-202ENST00000355379 TTC39BQ5VTQ0 682 aaPredicted RBP23.29■■□□□ 1.32
SCAMP3-202ENST00000355379 NAPEPLDQ6IQ20 393 aa23.29■■□□□ 1.32
SCAMP3-202ENST00000355379 OTOP3Q7RTS5 596 aa23.29■■□□□ 1.32
SCAMP3-202ENST00000355379 CIR1Q86X95 450 aaPredicted RBP23.29■■□□□ 1.32
SCAMP3-202ENST00000355379 NSMCE1Q8WV22 266 aa23.29■■□□□ 1.32
SCAMP3-202ENST00000355379 DCAKDQ8WVC6 231 aa23.29■■□□□ 1.32
SCAMP3-202ENST00000355379 ARNTL2Q8WYA1 636 aa23.29■■□□□ 1.32
SCAMP3-202ENST00000355379 MRPS31Q92665 395 aaKnown RBP23.29■■□□□ 1.32
SCAMP3-202ENST00000355379 OXNAD1Q96HP4 312 aaPredicted RBP23.29■■□□□ 1.32
SCAMP3-202ENST00000355379 MAGEH1Q9H213 219 aa23.29■■□□□ 1.32
SCAMP3-202ENST00000355379 TLR9Q9NR96 1032 aa23.29■■□□□ 1.32
SCAMP3-202ENST00000355379 AGO1Q9UL18 857 aaKnown RBP23.29■■□□□ 1.32
SCAMP3-202ENST00000355379 ZFP37Q9Y6Q3 630 aaPredicted RBP23.29■■□□□ 1.32
SCAMP3-202ENST00000355379 CLDN11O75508 207 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 HLA-DQB2P05538 268 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 PGAM1P18669 254 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 GABRR2P28476 465 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 SESN2P58004 480 aaPredicted RBP23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 EFTUD2Q15029 972 aaKnown RBP eCLIP23.28■■□□□ 1.326e-6■■□□□ 13.1
SCAMP3-202ENST00000355379 PLPP4Q5VZY2 271 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 RFWD3Q6PCD5 774 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 TRABD2AQ86V40 505 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 OR52K1Q8NGK4 314 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 SLC44A1Q8WWI5 657 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 SELENOSQ9BQE4 189 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 TRPC7Q9HCX4 862 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 H3BNC9 293 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 J3KR12 359 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 LPXNO60711 386 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 NEBLO76041 1014 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 ALDH1A2O94788 518 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 HDCP19113 662 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 DNAJB1P25685 340 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 CDC25CP30307 473 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 GUCY1A3Q02108 690 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 KBTBD12Q3ZCT8 623 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 MARC1Q5VT66 337 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 ZNF419Q96HQ0 510 aaPredicted RBP23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 PRICKLE1Q96MT3 831 aaPredicted RBP23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 SLC25A51Q9H1U9 297 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 MOCS1Q9NZB8 636 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 BFARQ9NZS9 450 aa23.28■■□□□ 1.32
SCAMP3-202ENST00000355379 MAGEB16A2A368 324 aa23.27■■□□□ 1.32
SCAMP3-202ENST00000355379 FAM159BA6NKW6 160 aa23.27■■□□□ 1.32
SCAMP3-202ENST00000355379 HIDE1A8MVS5 230 aa23.27■■□□□ 1.32
SCAMP3-202ENST00000355379 IRF1P10914 325 aa23.27■■□□□ 1.32
SCAMP3-202ENST00000355379 CLCN4P51793 760 aa23.27■■□□□ 1.32
SCAMP3-202ENST00000355379 SMAD3P84022 425 aaKnown RBP23.27■■□□□ 1.32
SCAMP3-202ENST00000355379 ZNF449Q6P9G9 518 aa23.27■■□□□ 1.32
SCAMP3-202ENST00000355379 GAREM2Q75VX8 874 aa23.27■■□□□ 1.32
SCAMP3-202ENST00000355379 PRPF39Q86UA1 669 aaKnown RBP23.27■■□□□ 1.32
SCAMP3-202ENST00000355379 HS6ST3Q8IZP7 471 aa23.27■■□□□ 1.32
SCAMP3-202ENST00000355379 CFAP52Q8N1V2 620 aa23.27■■□□□ 1.32
SCAMP3-202ENST00000355379 WBP2Q969T9 261 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms