RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 CRTC1Q6UUV9 634 aa11.55□□□□□ -0.56
RTN3-204ENST00000354497 ATG14Q6ZNE5 492 aa11.55□□□□□ -0.56
RTN3-204ENST00000354497 BHLHA9Q7RTU4 235 aa11.55□□□□□ -0.56
RTN3-204ENST00000354497 UNC45BQ8IWX7 931 aa11.55□□□□□ -0.56
RTN3-204ENST00000354497 CFAP52Q8N1V2 620 aa11.55□□□□□ -0.56
RTN3-204ENST00000354497 EXD3Q8N9H8 876 aa11.55□□□□□ -0.56
RTN3-204ENST00000354497 ANKRD52Q8NB46 1076 aa11.55□□□□□ -0.56
RTN3-204ENST00000354497 FIBINQ8TAL6 211 aa11.55□□□□□ -0.56
RTN3-204ENST00000354497 ARRDC3Q96B67 414 aa11.55□□□□□ -0.56
RTN3-204ENST00000354497 PRICKLE1Q96MT3 831 aaPredicted RBP11.55□□□□□ -0.56
RTN3-204ENST00000354497 SYNDIG1Q9H7V2 258 aa11.55□□□□□ -0.56
RTN3-204ENST00000354497 ABCC13Q9NSE7 274 aa11.55□□□□□ -0.56
RTN3-204ENST00000354497 COL6A6A6NMZ7 2263 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 CPED1A4D0V7 1026 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 KIF2AO00139 706 aaPredicted RBP11.54□□□□□ -0.56
RTN3-204ENST00000354497 PIK3R2O00459 728 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 IKBKBO14920 756 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 SLC31A1O15431 190 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 IRAK2O43187 625 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 NTRK1P04629 796 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 VAV1P15498 845 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 PRLRP16471 622 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 PDCP20941 246 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 DRD3P35462 400 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 NUDT1P36639 197 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 NNMTP40261 264 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 TBX4P57082 545 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 CUL4BQ13620 913 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 ELAVL3Q14576 367 aaKnown RBP11.54□□□□□ -0.56
RTN3-204ENST00000354497 ZNF542PQ5EBM4 170 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 FSCBQ5H9T9 825 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 NUGGCQ68CJ6 796 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 SYT10Q6XYQ8 523 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 ZNF574Q6ZN55 896 aaPredicted RBP11.54□□□□□ -0.56
RTN3-204ENST00000354497 KDM1BQ8NB78 822 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 SLC4A11Q8NBS3 891 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 ANKRD20A12PQ8NF67 263 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 PTPRN2Q92932 1015 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 MYEOVQ96EZ4 313 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 LMLNQ96KR4 655 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 DDX50Q9BQ39 737 aaKnown RBP11.54□□□□□ -0.56
RTN3-204ENST00000354497 FZD3Q9NPG1 666 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 KCND1Q9NSA2 647 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 CISHQ9NSE2 258 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 KLHL11Q9NVR0 708 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 DMAC2Q9NW81 257 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 HESX1Q9UBX0 185 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 ITIH6Q6UXX5 1313 aa11.54□□□□□ -0.56
RTN3-204ENST00000354497 PMS2P1A4D2B8 440 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 XPO1O14980 1071 aaKnown RBP11.53□□□□□ -0.56
RTN3-204ENST00000354497 PLRG1O43660 514 aaKnown RBP11.53□□□□□ -0.56
RTN3-204ENST00000354497 BNIP3LO60238 219 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 RNGTTO60942 597 aaKnown RBP11.53□□□□□ -0.56
RTN3-204ENST00000354497 PIAS2O75928 621 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 NEBLO76041 1014 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 MOCS2O96007 188 aaPredicted RBP11.53□□□□□ -0.56
RTN3-204ENST00000354497 GP1BAP07359 652 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 KRT13P13646 458 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 ZNF18P17022 549 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 TGM2P21980 687 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 RAD23BP54727 409 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 CNTN1Q12860 1018 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 CLN3Q13286 438 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 ARID5BQ14865 1188 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 CDKN3Q16667 212 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 C1orf220Q5T0J3 134 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 ARHGAP17Q68EM7 881 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 NADSYN1Q6IA69 706 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 CNNM4Q6P4Q7 775 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 USP53Q70EK8 1073 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 DSG4Q86SJ6 1040 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 TRIM69Q86WT6 500 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 GRAMD1CQ8IYS0 662 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 APCDD1Q8J025 514 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 ARL14Q8N4G2 192 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 OR13H1Q8NG92 308 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 UBA3Q8TBC4 463 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 EXTL1Q92935 676 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 SLC46A1Q96NT5 459 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 CCNL2Q96S94 520 aaPredicted RBP11.53□□□□□ -0.56
RTN3-204ENST00000354497 FAM107BQ9H098 131 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 NUCKS1Q9H1E3 243 aaKnown RBP11.53□□□□□ -0.56
RTN3-204ENST00000354497 EXOC1Q9NV70 894 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 DNAJC28Q9NX36 388 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 NLGN3Q9NZ94 848 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 TSPAN16Q9UKR8 245 aa11.53□□□□□ -0.56
RTN3-204ENST00000354497 A0A1W2PNU3 283 aaPredicted RBP11.52□□□□□ -0.56
RTN3-204ENST00000354497 NEMP2A6NFY4 417 aa11.52□□□□□ -0.56
RTN3-204ENST00000354497 C10orf142B7Z368 130 aa11.52□□□□□ -0.56
RTN3-204ENST00000354497 TERTO14746 1132 aaKnown RBP11.52□□□□□ -0.56
RTN3-204ENST00000354497 SPTLC2O15270 562 aa11.52□□□□□ -0.56
RTN3-204ENST00000354497 POLR2DO15514 142 aaKnown RBP11.52□□□□□ -0.56
RTN3-204ENST00000354497 SLC7A4O43246 635 aa11.52□□□□□ -0.56
RTN3-204ENST00000354497 TNFSF15O95150 251 aa11.52□□□□□ -0.56
RTN3-204ENST00000354497 LUC7L3O95232 432 aaKnown RBP11.52□□□□□ -0.56
RTN3-204ENST00000354497 IPO7O95373 1038 aaKnown RBP11.52□□□□□ -0.56
RTN3-204ENST00000354497 CD19P15391 556 aa11.52□□□□□ -0.56
RTN3-204ENST00000354497 H2AFXP16104 143 aaPredicted RBP11.52□□□□□ -0.56
RTN3-204ENST00000354497 RGS7P49802 495 aa11.52□□□□□ -0.56
RTN3-204ENST00000354497 PPP3CAQ08209 521 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms