RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 KIF1CO43896 1103 aaKnown RBP22.2■■□□□ 1.14
SHMT1-202ENST00000352886 MGEA5O60502 916 aa22.2■■□□□ 1.14
SHMT1-202ENST00000352886 CDC25CP30307 473 aa22.2■■□□□ 1.14
SHMT1-202ENST00000352886 CD52P31358 61 aa22.2■■□□□ 1.14
SHMT1-202ENST00000352886 CDK7P50613 346 aa22.2■■□□□ 1.14
SHMT1-202ENST00000352886 MXRA7P84157 204 aa22.2■■□□□ 1.14
SHMT1-202ENST00000352886 MGAT3Q09327 533 aa22.2■■□□□ 1.14
SHMT1-202ENST00000352886 CDH17Q12864 832 aa22.2■■□□□ 1.14
SHMT1-202ENST00000352886 THOC5Q13769 683 aaKnown RBP22.2■■□□□ 1.14
SHMT1-202ENST00000352886 ARHGAP36Q6ZRI8 547 aa22.2■■□□□ 1.14
SHMT1-202ENST00000352886 RASAL3Q86YV0 1011 aa22.2■■□□□ 1.14
SHMT1-202ENST00000352886 URGCPQ8TCY9 931 aa22.2■■□□□ 1.14
SHMT1-202ENST00000352886 PADI3Q9ULW8 664 aa22.2■■□□□ 1.14
SHMT1-202ENST00000352886 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.2■■□□□ 1.14
SHMT1-202ENST00000352886 TIMM44O43615 452 aa22.2■■□□□ 1.14
SHMT1-202ENST00000352886 MPOP05164 745 aa22.2■■□□□ 1.14
SHMT1-202ENST00000352886 HARS2P49590 506 aaKnown RBP22.2■■□□□ 1.14
SHMT1-202ENST00000352886 DNAL1Q4LDG9 190 aa22.2■■□□□ 1.14
SHMT1-202ENST00000352886 TRIM68Q6AZZ1 485 aa22.2■■□□□ 1.14
SHMT1-202ENST00000352886 LRRTM3Q86VH5 581 aa22.2■■□□□ 1.14
SHMT1-202ENST00000352886 SCUBE1Q8IWY4 988 aa22.2■■□□□ 1.14
SHMT1-202ENST00000352886 ACVR1CQ8NER5 493 aa22.2■■□□□ 1.14
SHMT1-202ENST00000352886 OR10T2Q8NGX3 314 aa22.2■■□□□ 1.14
SHMT1-202ENST00000352886 CLPTM1LQ96KA5 538 aa22.2■■□□□ 1.14
SHMT1-202ENST00000352886 THTPAQ9BU02 230 aa22.2■■□□□ 1.14
SHMT1-202ENST00000352886 MANSC4A6NHS7 340 aaPredicted RBP22.19■■□□□ 1.14
SHMT1-202ENST00000352886 IDH3AP50213 366 aa22.19■■□□□ 1.14
SHMT1-202ENST00000352886 DTX3LQ8TDB6 740 aa22.19■■□□□ 1.14
SHMT1-202ENST00000352886 VPS39Q96JC1 886 aa22.19■■□□□ 1.14
SHMT1-202ENST00000352886 OSBPL2Q9H1P3 480 aa22.19■■□□□ 1.14
SHMT1-202ENST00000352886 RRAGCQ9HB90 399 aa22.19■■□□□ 1.14
SHMT1-202ENST00000352886 DNAJC28Q9NX36 388 aa22.19■■□□□ 1.14
SHMT1-202ENST00000352886 NEU3Q9UQ49 428 aa22.19■■□□□ 1.14
SHMT1-202ENST00000352886 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.19■■□□□ 1.14
SHMT1-202ENST00000352886 NLRC5Q86WI3 1866 aa22.19■■□□□ 1.14
SHMT1-202ENST00000352886 TM7SF2O76062 418 aa22.19■■□□□ 1.14
SHMT1-202ENST00000352886 CYP11A1P05108 521 aa22.19■■□□□ 1.14
SHMT1-202ENST00000352886 C2P06681 752 aa22.19■■□□□ 1.14
SHMT1-202ENST00000352886 THPOP40225 353 aa22.19■■□□□ 1.14
SHMT1-202ENST00000352886 CSE1LP55060 971 aaKnown RBP22.19■■□□□ 1.14
SHMT1-202ENST00000352886 COG7P83436 770 aa22.19■■□□□ 1.14
SHMT1-202ENST00000352886 PPP2R5DQ14738 602 aa22.19■■□□□ 1.14
SHMT1-202ENST00000352886 VWA5B1Q5TIE3 1220 aa22.19■■□□□ 1.14
SHMT1-202ENST00000352886 CLEC14AQ86T13 490 aa22.19■■□□□ 1.14
SHMT1-202ENST00000352886 OR6Y1Q8NGX8 325 aa22.19■■□□□ 1.14
SHMT1-202ENST00000352886 SPATA22Q8NHS9 363 aa22.19■■□□□ 1.14
SHMT1-202ENST00000352886 PKMYT1Q99640 499 aa22.19■■□□□ 1.14
SHMT1-202ENST00000352886 OXCT2Q9BYC2 517 aaPredicted RBP22.19■■□□□ 1.14
SHMT1-202ENST00000352886 FAM96AQ9H5X1 160 aa22.19■■□□□ 1.14
SHMT1-202ENST00000352886 BATF3Q9NR55 127 aa22.19■■□□□ 1.14
SHMT1-202ENST00000352886 INPP5FQ9Y2H2 1132 aa22.19■■□□□ 1.14
SHMT1-202ENST00000352886 SIN3BO75182 1162 aa22.18■■□□□ 1.14
SHMT1-202ENST00000352886 IGLV3-25P01717 112 aa22.18■■□□□ 1.14
SHMT1-202ENST00000352886 CD300LGQ6UXG3 332 aa22.18■■□□□ 1.14
SHMT1-202ENST00000352886 ULK2Q8IYT8 1036 aa22.18■■□□□ 1.14
SHMT1-202ENST00000352886 CFAP61Q8NHU2 1237 aa22.18■■□□□ 1.14
SHMT1-202ENST00000352886 MCMBPQ9BTE3 642 aa22.18■■□□□ 1.14
SHMT1-202ENST00000352886 C1orf21Q9H246 121 aa22.18■■□□□ 1.14
SHMT1-202ENST00000352886 MEI4A8MW99 385 aa22.18■■□□□ 1.14
SHMT1-202ENST00000352886 G3V2L1 256 aa22.18■■□□□ 1.14
SHMT1-202ENST00000352886 ZNF195O14628 629 aa22.18■■□□□ 1.14
SHMT1-202ENST00000352886 TBX10O75333 385 aa22.18■■□□□ 1.14
SHMT1-202ENST00000352886 ALOX15P16050 662 aaPredicted RBP22.18■■□□□ 1.14
SHMT1-202ENST00000352886 CTGFP29279 349 aa22.18■■□□□ 1.14
SHMT1-202ENST00000352886 LINC00523Q86TU6 105 aa22.18■■□□□ 1.14
SHMT1-202ENST00000352886 SCML4Q8N228 414 aa22.18■■□□□ 1.14
SHMT1-202ENST00000352886 PCDHB12Q9Y5F1 795 aa22.18■■□□□ 1.14
SHMT1-202ENST00000352886 TTC3P53804 2025 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 IRAK2O43187 625 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 ZNF623O75123 536 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 KLHL2O95198 593 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 MT-CYBP00156 380 aaPredicted RBP22.17■■□□□ 1.14
SHMT1-202ENST00000352886 SLC34A1Q06495 639 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 MUM1Q2TAK8 710 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 SNX30Q5VWJ9 437 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 NAPRTQ6XQN6 538 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 ATPAF2Q8N5M1 289 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 NMRAL1Q9HBL8 299 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 ARHGEF38Q9NXL2 777 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 SLC39A10Q9ULF5 831 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 PATJQ8NI35 1801 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 AP3B1O00203 1094 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 LUC7L3O95232 432 aaKnown RBP22.17■■□□□ 1.14
SHMT1-202ENST00000352886 YY1P25490 414 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 CYP2C18P33260 490 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 VHLP40337 213 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 ZNF33AQ06730 810 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 EIF4EBP2Q13542 120 aaPredicted RBP22.17■■□□□ 1.14
SHMT1-202ENST00000352886 GRM3Q14832 879 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 OVOS1Q6IE37 1185 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 ARHGAP12Q8IWW6 846 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 NRG4Q8WWG1 115 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 DNAJC9Q8WXX5 260 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 ZNF419Q96HQ0 510 aaPredicted RBP22.17■■□□□ 1.14
SHMT1-202ENST00000352886 TSGA13Q96PP4 275 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 TRIM62Q9BVG3 475 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 KIFC1Q9BW19 673 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 NMRK1Q9NWW6 199 aa22.17■■□□□ 1.14
SHMT1-202ENST00000352886 STX18Q9P2W9 335 aaKnown RBP22.17■■□□□ 1.14
SHMT1-202ENST00000352886 SLC7A8Q9UHI5 535 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms