RNA–Protein interactions for RNA: ENST00000352260.11

SPNS1-204, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-204ENST00000352260 SLC39A12Q504Y0 691 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 TRIM42Q8IWZ5 723 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 SCAMP5Q8TAC9 235 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 SEPT8Q92599 483 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 DEFB118Q96PH6 123 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 PTTG2Q9NZH5 202 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 WASF2Q9Y6W5 498 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 A0A1W2PPM1 405 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 FAM72CH0Y354 149 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 PITPNM1O00562 1244 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 FCHO1O14526 889 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 TADA2AO75478 443 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 F9P00740 461 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 GRIK1P39086 918 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 NEK3P51956 506 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 GPX6P59796 221 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 SFSWAPQ12872 951 aaKnown RBP19.04■□□□□ 0.64
SPNS1-204ENST00000352260 SEMA3BQ13214 749 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 FAXCQ5TGI0 409 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 FAM72AQ5TYM5 149 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 FAM72DQ6L9T8 149 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 CAPN12Q6ZSI9 719 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 RFX8Q6ZV50 586 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 TAC4Q86UU9 113 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 LRRC6Q86X45 466 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 FAM72BQ86X60 149 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 ABI1Q8IZP0 508 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 PDIK1LQ8N165 341 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 ATP11CQ8NB49 1132 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 MZB1Q8WU39 189 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 FAM161BQ96MY7 647 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 CASD1Q96PB1 797 aa19.04■□□□□ 0.64
SPNS1-204ENST00000352260 SF3B1O75533 1304 aaKnown RBP eCLIP19.03■□□□□ 0.642e-6■■■■■ 103.4
SPNS1-204ENST00000352260 CAPN14A8MX76 684 aa19.03■□□□□ 0.64
SPNS1-204ENST00000352260 HACD1B0YJ81 288 aa19.03■□□□□ 0.64
SPNS1-204ENST00000352260 TNFRSF10BO14763 440 aa19.03■□□□□ 0.64
SPNS1-204ENST00000352260 GCATO75600 419 aa19.03■□□□□ 0.64
SPNS1-204ENST00000352260 ASLP04424 464 aa19.03■□□□□ 0.64
SPNS1-204ENST00000352260 VAV1P15498 845 aa19.03■□□□□ 0.64
SPNS1-204ENST00000352260 CXCR3P49682 368 aa19.03■□□□□ 0.64
SPNS1-204ENST00000352260 SLC5A3P53794 718 aa19.03■□□□□ 0.64
SPNS1-204ENST00000352260 IRX4P78413 519 aa19.03■□□□□ 0.64
SPNS1-204ENST00000352260 BBS9Q3SYG4 887 aa19.03■□□□□ 0.64
SPNS1-204ENST00000352260 DCP1BQ8IZD4 617 aaKnown RBP19.03■□□□□ 0.64
SPNS1-204ENST00000352260 TCP10LQ8TDR4 215 aa19.03■□□□□ 0.64
SPNS1-204ENST00000352260 PYROXD1Q8WU10 500 aa19.03■□□□□ 0.64
SPNS1-204ENST00000352260 TFB1MQ8WVM0 346 aaKnown RBP19.03■□□□□ 0.64
SPNS1-204ENST00000352260 PLEKHG4BQ96PX9 1271 aa19.03■□□□□ 0.64
SPNS1-204ENST00000352260 COLEC11Q9BWP8 271 aa19.03■□□□□ 0.64
SPNS1-204ENST00000352260 ACSS3Q9H6R3 686 aa19.03■□□□□ 0.64
SPNS1-204ENST00000352260 PLA2G4CQ9UP65 541 aa19.03■□□□□ 0.64
SPNS1-204ENST00000352260 SYN3O14994 580 aa19.02■□□□□ 0.64
SPNS1-204ENST00000352260 DCLK1O15075 740 aa19.02■□□□□ 0.64
SPNS1-204ENST00000352260 PQBP1O60828 265 aaKnown RBP19.02■□□□□ 0.64
SPNS1-204ENST00000352260 FAM155BO75949 473 aa19.02■□□□□ 0.64
SPNS1-204ENST00000352260 ZCCHC18P0CG32 403 aa19.02■□□□□ 0.64
SPNS1-204ENST00000352260 MAGEA6P43360 314 aa19.02■□□□□ 0.64
SPNS1-204ENST00000352260 PAFAH1B3Q15102 231 aaKnown RBP19.02■□□□□ 0.64
SPNS1-204ENST00000352260 ARL13BQ3SXY8 428 aa19.02■□□□□ 0.64
SPNS1-204ENST00000352260 VARS2Q5ST30 1063 aaKnown RBP19.02■□□□□ 0.64
SPNS1-204ENST00000352260 SYCP2LQ5T4T6 812 aa19.02■□□□□ 0.64
SPNS1-204ENST00000352260 C4orf22Q6V702 233 aa19.02■□□□□ 0.64
SPNS1-204ENST00000352260 BEND5Q7L4P6 421 aa19.02■□□□□ 0.64
SPNS1-204ENST00000352260 FBXO36Q8NEA4 188 aa19.02■□□□□ 0.64
SPNS1-204ENST00000352260 DQX1Q8TE96 717 aaKnown RBP19.02■□□□□ 0.64
SPNS1-204ENST00000352260 KLC2Q9H0B6 622 aa19.02■□□□□ 0.64
SPNS1-204ENST00000352260 DNAAF2Q9NVR5 837 aaKnown RBP19.02■□□□□ 0.64
SPNS1-204ENST00000352260 RABGEF1Q9UJ41 708 aa19.02■□□□□ 0.64
SPNS1-204ENST00000352260 SORCS3Q9UPU3 1222 aa19.02■□□□□ 0.64
SPNS1-204ENST00000352260 IFRD2Q12894 506 aaPredicted RBP19.02■□□□□ 0.63
SPNS1-204ENST00000352260 MTM1Q13496 603 aa19.02■□□□□ 0.63
SPNS1-204ENST00000352260 MED21Q13503 144 aa19.02■□□□□ 0.63
SPNS1-204ENST00000352260 HEATR6Q6AI08 1181 aaKnown RBP19.02■□□□□ 0.63
SPNS1-204ENST00000352260 RIPOR1Q6ZS17 1223 aa19.02■□□□□ 0.63
SPNS1-204ENST00000352260 SPATA24Q86W54 205 aa19.02■□□□□ 0.63
SPNS1-204ENST00000352260 PDSS2Q86YH6 399 aa19.02■□□□□ 0.63
SPNS1-204ENST00000352260 NETO2Q8NC67 525 aa19.02■□□□□ 0.63
SPNS1-204ENST00000352260 APBB2Q92870 758 aa19.02■□□□□ 0.63
SPNS1-204ENST00000352260 TRIM62Q9BVG3 475 aa19.02■□□□□ 0.63
SPNS1-204ENST00000352260 GALNT8Q9NY28 637 aa19.02■□□□□ 0.63
SPNS1-204ENST00000352260 ABI2Q9NYB9 513 aaPredicted RBP19.02■□□□□ 0.63
SPNS1-204ENST00000352260 TAGLN3Q9UI15 199 aa19.02■□□□□ 0.63
SPNS1-204ENST00000352260 OGDHLQ9ULD0 1010 aa19.02■□□□□ 0.63
SPNS1-204ENST00000352260 LRFN2Q9ULH4 789 aa19.02■□□□□ 0.63
SPNS1-204ENST00000352260 RPS6KL1Q9Y6S9 549 aa19.02■□□□□ 0.63
SPNS1-204ENST00000352260 B2RBV5 119 aa19.01■□□□□ 0.63
SPNS1-204ENST00000352260 SPECC1L-ADORA2AF8WAN1 911 aa19.01■□□□□ 0.63
SPNS1-204ENST00000352260 BUD23O43709 281 aaKnown RBP19.01■□□□□ 0.63
SPNS1-204ENST00000352260 METTL18O95568 372 aa19.01■□□□□ 0.63
SPNS1-204ENST00000352260 CCL5P13501 91 aa19.01■□□□□ 0.63
SPNS1-204ENST00000352260 YWHAGP61981 247 aaKnown RBP eCLIP19.01■□□□□ 0.63
SPNS1-204ENST00000352260 SCN4BQ8IWT1 228 aa19.01■□□□□ 0.63
SPNS1-204ENST00000352260 OR6Y1Q8NGX8 325 aa19.01■□□□□ 0.63
SPNS1-204ENST00000352260 HTR3CQ8WXA8 447 aa19.01■□□□□ 0.63
SPNS1-204ENST00000352260 LGMNQ99538 433 aa19.01■□□□□ 0.63
SPNS1-204ENST00000352260 TKTL2Q9H0I9 626 aa19.01■□□□□ 0.63
SPNS1-204ENST00000352260 WDCPQ9H6R7 721 aa19.01■□□□□ 0.63
SPNS1-204ENST00000352260 ADAM28Q9UKQ2 775 aa19.01■□□□□ 0.63
SPNS1-204ENST00000352260 NR2E3Q9Y5X4 410 aa19.01■□□□□ 0.63
SPNS1-204ENST00000352260 IGLV3-25P01717 112 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms