RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 IFNA8P32881 189 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 MAPK9P45984 424 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 RAP1GDS1P52306 607 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 ARHGDIAP52565 204 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 HSPA14Q0VDF9 509 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 SETMARQ53H47 684 aaPredicted RBP13.94□□□□□ -0.18
SMC6-201ENST00000351948 PPP4R4Q6NUP7 873 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 NLRP9Q7RTR0 991 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 OTOP3Q7RTS5 596 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 HJURPQ8NCD3 748 aaPredicted RBP13.94□□□□□ -0.18
SMC6-201ENST00000351948 TMEM161AQ9NX61 479 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 CLTBP09497 229 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 CYP3A5P20815 502 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 PDPK2PQ6A1A2 396 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 FAM124AQ86V42 546 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 ZNF333Q96JL9 665 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 HNRNPABQ99729 332 aaKnown RBP13.94□□□□□ -0.18
SMC6-201ENST00000351948 OMDQ99983 421 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 PRKD2Q9BZL6 878 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 LRRC19Q9H756 370 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 ASB8Q9H765 288 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 KIAA0100Q14667 2235 aaKnown RBP13.93□□□□□ -0.18
SMC6-201ENST00000351948 C1orf232A0A0U1RR37 186 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 SLC9A3R1O14745 358 aaPredicted RBP13.93□□□□□ -0.18
SMC6-201ENST00000351948 EOMESO95936 686 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 PCNAP12004 261 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 ADRA1DP25100 572 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 SPANXN3Q5MJ09 141 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 OOSP2Q86WS3 158 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 C16orf70Q9BSU1 422 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 TAS2R13Q9NYV9 303 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 GJA1P17302 382 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 KCNK10P57789 538 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 SNRPD1P62314 119 aaKnown RBP13.93□□□□□ -0.18
SMC6-201ENST00000351948 CTBP1Q13363 440 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 HIST2H2ACQ16777 129 aaPredicted RBP13.93□□□□□ -0.18
SMC6-201ENST00000351948 MFSD4BQ5TF39 518 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 HIST2H2AA3Q6FI13 130 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 TMC5Q6UXY8 1006 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 SLC44A2Q8IWA5 706 aaPredicted RBP13.93□□□□□ -0.18
SMC6-201ENST00000351948 JADE3Q92613 823 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 PCYOX1Q9UHG3 505 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 AGO1Q9UL18 857 aaKnown RBP13.93□□□□□ -0.18
SMC6-201ENST00000351948 CHKBQ9Y259 395 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 TLL2Q9Y6L7 1015 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 MAP2K2P36507 400 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 NUDT2P50583 147 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 CREMQ03060 361 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 LZICQ8WZA0 190 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 SDK1Q7Z5N4 2213 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 DDX3YO15523 660 aaKnown RBP13.93□□□□□ -0.18
SMC6-201ENST00000351948 PDHA1P08559 390 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 RBP1P09455 135 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 VEGFBP49765 207 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 STRADAQ7RTN6 431 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 NCKIPSDQ9NZQ3 722 aa13.93□□□□□ -0.18
SMC6-201ENST00000351948 PRRC2BQ5JSZ5 2229 aaKnown RBP13.92□□□□□ -0.18
SMC6-201ENST00000351948 FAM95CA0A1B0GW59 222 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 UNCXA6NJT0 531 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 TPST1O60507 370 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 EFCAB14O75071 495 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 FBXW4P57775 412 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 CYP4F8P98187 520 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 USP45Q70EL2 814 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 SLC26A9Q7LBE3 791 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 NDE1Q9NXR1 346 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 LRIG2O94898 1065 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 ITGAVP06756 1048 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 C8AP07357 584 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 TFE3P19532 575 aaPredicted RBP13.92□□□□□ -0.18
SMC6-201ENST00000351948 CDC25CP30307 473 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 ABCE1P61221 599 aaKnown RBP13.92□□□□□ -0.18
SMC6-201ENST00000351948 DSG4Q86SJ6 1040 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 MIER2Q8N344 545 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 FLCNQ8NFG4 579 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 PIK3R5Q8WYR1 880 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 MFSD1Q9H3U5 465 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 A0A0U1RQF3 1178 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 C5orf58C9J3I9 102 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 FKBP9O95302 570 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 WNT3AP56704 352 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 MTA1Q13330 715 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 CERCAMQ5T4B2 595 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 FKBP9P1Q75LS8 142 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 APTXQ7Z2E3 356 aaKnown RBP13.92□□□□□ -0.18
SMC6-201ENST00000351948 SERAC1Q96JX3 654 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 BTN2A3PQ96KV6 586 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 C17orf80Q9BSJ5 609 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 IL22Q9GZX6 179 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 CATSPERZQ9NTU4 200 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 SYBUQ9NX95 663 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 KIF17Q9P2E2 1029 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 LNPEPQ9UIQ6 1025 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 ZMYM5Q9UJ78 669 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 PCDHGC3Q9UN70 934 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 IFRD1O00458 451 aaPredicted RBP13.92□□□□□ -0.18
SMC6-201ENST00000351948 TPP1O14773 563 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 CHADO15335 359 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 ZNF135P52742 658 aaPredicted RBP13.92□□□□□ -0.18
SMC6-201ENST00000351948 POLR2LP62875 67 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 208.9 ms