RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 CYBAP13498 195 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 CCNCP24863 283 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 POLD2P49005 469 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 DPYSL2Q16555 572 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 BTN2A1Q7KYR7 527 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 FAM9CQ8IZT9 166 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 DQX1Q8TE96 717 aaKnown RBP12.38□□□□□ -0.43
SMAD9-201ENST00000350148 KCTD15Q96SI1 283 aaPredicted RBP12.38□□□□□ -0.43
SMAD9-201ENST00000350148 EIF2B3Q9NR50 452 aaKnown RBP12.38□□□□□ -0.43
SMAD9-201ENST00000350148 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.38□□□□□ -0.43
SMAD9-201ENST00000350148 ARHGAP10A1A4S6 786 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 KCNK1O00180 336 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 GPR32O75388 356 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 STBD1O95210 358 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 MAPKAPK2P49137 400 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 MMRN1Q13201 1228 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 VARS2Q5ST30 1063 aaKnown RBP12.38□□□□□ -0.43
SMAD9-201ENST00000350148 TFAP2DQ7Z6R9 452 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 TMEM192Q8IY95 271 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 TRIML2Q8N7C3 387 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 PIP4K2CQ8TBX8 421 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 NDEL1Q9GZM8 345 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 CLPBQ9H078 707 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 DDX28Q9NUL7 540 aaKnown RBP12.38□□□□□ -0.43
SMAD9-201ENST00000350148 STOML1Q9UBI4 398 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 SIX4Q9UIU6 781 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 FZD10Q9ULW2 581 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 L3MBTL1Q9Y468 752 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 PYGBP11216 843 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 PSMB4P28070 264 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 PTGIRP43119 386 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 TRIP4Q15650 581 aaPredicted RBP12.38□□□□□ -0.43
SMAD9-201ENST00000350148 TRIM60Q495X7 471 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 LRRC8BQ6P9F7 803 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 CYB5D1Q6P9G0 228 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 IQCKQ8N0W5 287 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 CMASQ8NFW8 434 aaPredicted RBP12.38□□□□□ -0.43
SMAD9-201ENST00000350148 MDM1Q8TC05 714 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 PLD4Q96BZ4 506 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 FCRL2Q96LA5 508 aaPredicted RBP12.38□□□□□ -0.43
SMAD9-201ENST00000350148 ASB2Q96Q27 587 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 KLF6Q99612 283 aaPredicted RBP12.38□□□□□ -0.43
SMAD9-201ENST00000350148 RNF19AQ9NV58 838 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 CD274Q9NZQ7 290 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 GNEQ9Y223 722 aaKnown RBP12.38□□□□□ -0.43
SMAD9-201ENST00000350148 ASB3Q9Y575 518 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 SUPT3HB4E1H0 165 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 PAGE1O75459 146 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 SUPT3HO75486 399 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 CPA3P15088 417 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 CHRM3P20309 590 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 SCNN1BP51168 640 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 OCA2Q04671 838 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 MFSD5Q6N075 450 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 C16orf89Q6UX73 402 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 ARCQ7LC44 396 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 B4GALNT2Q8NHY0 566 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 HAPLN3Q96S86 360 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 FBXW11Q9UKB1 542 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 MYO5AQ9Y4I1 1855 aaKnown RBP12.37□□□□□ -0.43
SMAD9-201ENST00000350148 LRRC37AA6NMS7 1700 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.37□□□□□ -0.43
SMAD9-201ENST00000350148 NVLO15381 856 aaKnown RBP12.37□□□□□ -0.43
SMAD9-201ENST00000350148 ADRA1DP25100 572 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 SSTR1P30872 391 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 ZNF284Q2VY69 593 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 RAP1GAP2Q684P5 730 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 DPF3Q92784 378 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 DPEP3Q9H4B8 488 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 NMRAL1Q9HBL8 299 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 FETUBQ9UGM5 382 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 GGA2Q9UJY4 613 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 RUVBL2Q9Y230 463 aaKnown RBP12.37□□□□□ -0.43
SMAD9-201ENST00000350148 ZSCAN5DPP0CG00 497 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 CCND3P30281 292 aaPredicted RBP12.37□□□□□ -0.43
SMAD9-201ENST00000350148 NDST2P52849 883 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 DMPKQ09013 629 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 C1orf220Q5T0J3 134 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 DSG4Q86SJ6 1040 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 KIF2BQ8N4N8 673 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 A0A1W2PQH9 124 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 FGBP02675 491 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 HDCP19113 662 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 HLA-DPA1P20036 260 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 OR1D2P34982 312 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 AUHQ13825 339 aaKnown RBP12.37□□□□□ -0.43
SMAD9-201ENST00000350148 GRM3Q14832 879 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 TIGD5Q53EQ6 642 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 ARMC12Q5T9G4 340 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 SLC35F5Q8WV83 523 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 PRCCQ92733 491 aaPredicted RBP12.37□□□□□ -0.43
SMAD9-201ENST00000350148 KCNK16Q96T55 309 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 B3GNT5Q9BYG0 378 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 XYLT2Q9H1B5 865 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 KDM4CQ9H3R0 1056 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 ERVK-5Q9HDB9 667 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 ALG13Q9NP73 1137 aaKnown RBP12.37□□□□□ -0.43
SMAD9-201ENST00000350148 MSRAQ9UJ68 235 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 SBF2Q86WG5 1849 aa12.37□□□□□ -0.43
SMAD9-201ENST00000350148 SERPINE1P05121 402 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms