RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 PITPNM1O00562 1244 aa17.02■□□□□ 0.32
SAMM50-201ENST00000350028 ATP9BO43861 1147 aa17.02■□□□□ 0.32
SAMM50-201ENST00000350028 BPGMP07738 259 aa17.02■□□□□ 0.32
SAMM50-201ENST00000350028 USP46P62068 366 aa17.02■□□□□ 0.32
SAMM50-201ENST00000350028 GPR17Q13304 367 aa17.02■□□□□ 0.32
SAMM50-201ENST00000350028 ANO4Q32M45 955 aa17.02■□□□□ 0.32
SAMM50-201ENST00000350028 FUT10Q6P4F1 479 aa17.02■□□□□ 0.32
SAMM50-201ENST00000350028 NPAS4Q8IUM7 802 aa17.02■□□□□ 0.32
SAMM50-201ENST00000350028 FBXO32Q969P5 355 aa17.02■□□□□ 0.32
SAMM50-201ENST00000350028 KLHL29Q96CT2 875 aa17.02■□□□□ 0.32
SAMM50-201ENST00000350028 ERP27Q96DN0 273 aa17.02■□□□□ 0.32
SAMM50-201ENST00000350028 SPATA17Q96L03 361 aa17.02■□□□□ 0.32
SAMM50-201ENST00000350028 C7orf26Q96N11 449 aa17.02■□□□□ 0.32
SAMM50-201ENST00000350028 MRPL9Q9BYD2 267 aaKnown RBP17.02■□□□□ 0.32
SAMM50-201ENST00000350028 MARCH5Q9NX47 278 aa17.02■□□□□ 0.32
SAMM50-201ENST00000350028 SLC17A6Q9P2U8 582 aa17.02■□□□□ 0.32
SAMM50-201ENST00000350028 PPARGC1AQ9UBK2 798 aaKnown RBP17.02■□□□□ 0.32
SAMM50-201ENST00000350028 MTO1Q9Y2Z2 717 aaKnown RBP17.02■□□□□ 0.32
SAMM50-201ENST00000350028 PSAT1Q9Y617 370 aa17.02■□□□□ 0.32
SAMM50-201ENST00000350028 TPP1O14773 563 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 ALDOAP04075 364 aaKnown RBP17.01■□□□□ 0.31
SAMM50-201ENST00000350028 CPB1P15086 417 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 NQO1P15559 274 aaKnown RBP17.01■□□□□ 0.31
SAMM50-201ENST00000350028 RHOQP17081 205 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 ARFIP2P53365 341 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 OVGP1Q12889 678 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 TRIP4Q15650 581 aaPredicted RBP17.01■□□□□ 0.31
SAMM50-201ENST00000350028 ACBD5Q5T8D3 534 aaPredicted RBP17.01■□□□□ 0.31
SAMM50-201ENST00000350028 TEDDM1Q5T9Z0 273 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 PIK3R6Q5UE93 754 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 CYB5D1Q6P9G0 228 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 CCDC91Q7Z6B0 441 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 CCDC117Q8IWD4 279 aaPredicted RBP17.01■□□□□ 0.31
SAMM50-201ENST00000350028 RFWD2Q8NHY2 731 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 C2orf15Q8WU43 125 aaKnown RBP17.01■□□□□ 0.31
SAMM50-201ENST00000350028 FATE1Q969F0 183 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 RBBP8Q99708 897 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 TBL1YQ9BQ87 522 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 APOL2Q9BQE5 337 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 KIFC1Q9BW19 673 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 TLR8Q9NR97 1041 aaKnown RBP17.01■□□□□ 0.31
SAMM50-201ENST00000350028 UBP1Q9NZI7 540 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 TTC3P53804 2025 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 MTMR11A4FU01 709 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 TBC1D4O60343 1298 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 UNC5CO95185 931 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 HAPLN1P10915 354 aaPredicted RBP17.01■□□□□ 0.31
SAMM50-201ENST00000350028 GATMP50440 423 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 PAPOLAP51003 745 aaKnown RBP17.01■□□□□ 0.31
SAMM50-201ENST00000350028 NDST2P52849 883 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 CSE1LP55060 971 aaKnown RBP17.01■□□□□ 0.31
SAMM50-201ENST00000350028 ARPP19P56211 112 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 ELF3P78545 371 aaPredicted RBP17.01■□□□□ 0.31
SAMM50-201ENST00000350028 TMPRSS15P98073 1019 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 PDE1CQ14123 709 aaPredicted RBP17.01■□□□□ 0.31
SAMM50-201ENST00000350028 PCID2Q5JVF3 399 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 TBC1D1Q86TI0 1168 aaPredicted RBP17.01■□□□□ 0.31
SAMM50-201ENST00000350028 ZNF683Q8IZ20 524 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 UMODL1-AS1Q8N2C9 162 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 ISL2Q96A47 359 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 ZYG11BQ9C0D3 744 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 PRDM5Q9NQX1 630 aaPredicted RBP17.01■□□□□ 0.31
SAMM50-201ENST00000350028 NDFIP2Q9NV92 336 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.01■□□□□ 0.31
SAMM50-201ENST00000350028 RBM22Q9NW64 420 aaKnown RBP eCLIP17.01■□□□□ 0.31
SAMM50-201ENST00000350028 NSMCE4AQ9NXX6 385 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 MPP6Q9NZW5 540 aa17.01■□□□□ 0.31
SAMM50-201ENST00000350028 HGSO14964 777 aaPredicted RBP17■□□□□ 0.31
SAMM50-201ENST00000350028 NEBLO76041 1014 aa17■□□□□ 0.31
SAMM50-201ENST00000350028 GALTP07902 379 aa17■□□□□ 0.31
SAMM50-201ENST00000350028 HSPA8P11142 646 aaKnown RBP17■□□□□ 0.31
SAMM50-201ENST00000350028 TPH1P17752 444 aa17■□□□□ 0.31
SAMM50-201ENST00000350028 TYK2P29597 1187 aa17■□□□□ 0.31
SAMM50-201ENST00000350028 LIMK2P53671 638 aa17■□□□□ 0.31
SAMM50-201ENST00000350028 RPL10AP62906 217 aaKnown RBP17■□□□□ 0.31
SAMM50-201ENST00000350028 CDK18Q07002 472 aa17■□□□□ 0.31
SAMM50-201ENST00000350028 EFEMP1Q12805 493 aa17■□□□□ 0.31
SAMM50-201ENST00000350028 CHI3L2Q15782 390 aa17■□□□□ 0.31
SAMM50-201ENST00000350028 ANKS3Q6ZW76 656 aa17■□□□□ 0.31
SAMM50-201ENST00000350028 ASRGL1Q7L266 308 aa17■□□□□ 0.31
SAMM50-201ENST00000350028 STRA8Q7Z7C7 330 aa17■□□□□ 0.31
SAMM50-201ENST00000350028 KCNMB4Q86W47 210 aa17■□□□□ 0.31
SAMM50-201ENST00000350028 TTC9BQ8N6N2 239 aa17■□□□□ 0.31
SAMM50-201ENST00000350028 MFSD3Q96ES6 412 aa17■□□□□ 0.31
SAMM50-201ENST00000350028 BTN2A3PQ96KV6 586 aa17■□□□□ 0.31
SAMM50-201ENST00000350028 MECRQ9BV79 373 aa17■□□□□ 0.31
SAMM50-201ENST00000350028 ENTPD7Q9NQZ7 604 aa17■□□□□ 0.31
SAMM50-201ENST00000350028 ARHGEF3Q9NR81 526 aa17■□□□□ 0.31
SAMM50-201ENST00000350028 CHRAC1Q9NRG0 131 aa17■□□□□ 0.31
SAMM50-201ENST00000350028 C20orf96Q9NUD7 363 aaPredicted RBP17■□□□□ 0.31
SAMM50-201ENST00000350028 TMEM248Q9NWD8 314 aa17■□□□□ 0.31
SAMM50-201ENST00000350028 IPO11Q9UI26 975 aaKnown RBP17■□□□□ 0.31
SAMM50-201ENST00000350028 DCTN4Q9UJW0 460 aa17■□□□□ 0.31
SAMM50-201ENST00000350028 MAGEA12P43365 314 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 SERPINB8P50452 374 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 BST1Q10588 318 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 MTA1Q13330 715 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 MGAT5BQ3V5L5 792 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 MS4A13Q5J8X5 152 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 N4BP2L1Q5TBK1 243 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms