RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 A0A0J9YVX5 310 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 MUTP22033 750 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 GARTP22102 1010 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 TMEM132BQ14DG7 1078 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 BBS7Q8IWZ6 715 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 ASCC1Q8N9N2 400 aaKnown RBP11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 TMEM176AQ96HP8 235 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 SNX27Q96L92 541 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 TMEM121Q9BTD3 319 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 C2orf49Q9BVC5 232 aaPredicted RBP11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 DDX43Q9NXZ2 648 aaKnown RBP11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 SPASTQ9UBP0 616 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 VPS28Q9UK41 221 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 STARD13Q9Y3M8 1113 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 RIMBP3CA6NJZ7 1639 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 RIMBP3BA6NNM3 1639 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 RIMBP3Q9UFD9 1639 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 ISPDA4D126 451 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 FAM86B1E9PN63 330 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 CBX4O00257 560 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 FAM86B2P0C5J1 330 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 NUP62P37198 522 aaPredicted RBP11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 TKTL1P51854 596 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 NME5P56597 212 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 CARTPTQ16568 116 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 BORAQ6PGQ7 559 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 CENPSQ8N2Z9 138 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 VANGL1Q8TAA9 524 aaPredicted RBP11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 RORBQ92753 470 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 C2orf81A6NN90 581 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 ZNF879B4DU55 563 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 TSPAN3O60637 253 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 ABCB1P08183 1280 aaPredicted RBP11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 RARAP10276 462 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 THRAP10827 490 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 SLC2A3P11169 496 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 FCGR1AP12314 374 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 PRG2P13727 222 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 RFX3P48380 749 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 BCAT1P54687 386 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 PURAQ00577 322 aaKnown RBP11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 ZNF268Q14587 947 aaPredicted RBP11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 SSX2Q16385 188 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 FUT11Q495W5 492 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 BROXQ5VW32 411 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 TMC7Q7Z402 723 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 FBXO36Q8NEA4 188 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 CDCA5Q96FF9 252 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 FAM111AQ96PZ2 611 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 CIPCQ9C0C6 399 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 GRID1Q9ULK0 1009 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 FAM32AQ9Y421 112 aaKnown RBP11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 ANKRD33BA6NCL7 494 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 C12orf71A8MTZ7 269 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 NCAM2O15394 837 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 TOMM70O94826 608 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 CAMK1DQ8IU85 385 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 SPARTQ8N0X7 666 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 CYP4X1Q8N118 509 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 CLHC1Q8NHS4 586 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 FAM45AQ8TCE6 357 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 ANKRD49Q8WVL7 239 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 E2F7Q96AV8 911 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 CELF6Q96J87 481 aaKnown RBP11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 HERC2P3Q9BVR0 1158 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 RIOX1Q9H6W3 641 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 CRNNQ9UBG3 495 aaPredicted RBP11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 USP18Q9UMW8 372 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 AP4E1Q9UPM8 1137 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 AP4B1Q9Y6B7 739 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 VEGFAP15692 232 aaPredicted RBP11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 GEMP55040 296 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 BEX3Q00994 111 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 AGAP9Q5VTM2 703 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 LINC00523Q86TU6 105 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 OR7G1Q8NGA0 311 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 OXNAD1Q96HP4 312 aaPredicted RBP11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 FICDQ9BVA6 458 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 HDHD2Q9H0R4 259 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 EVLQ9UI08 416 aaPredicted RBP11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 CDV3Q9UKY7 258 aaKnown RBP11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 CAPN6Q9Y6Q1 641 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 CLOCKO15516 846 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 SLC26A3P40879 764 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 MSLNQ13421 630 aaPredicted RBP11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 MOXD1Q6UVY6 613 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 WDR49Q8IV35 697 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 C4orf19Q8IY42 314 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 SLC7A5P1Q8MH63 180 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 RIN3Q8TB24 985 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 OR2B2Q9GZK3 357 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 CYP4F12Q9HCS2 524 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 NT5MQ9NPB1 228 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 PLK2Q9NYY3 685 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 TRPM5Q9NZQ8 1165 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 RNF112Q9ULX5 631 aa11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 RUVBL2Q9Y230 463 aaKnown RBP11.26□□□□□ -0.61
SMARCE1-202ENST00000348513 METTL21EPA6NDL7 271 aa11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 SYNCRIPO60506 623 aaKnown RBP11.25□□□□□ -0.61
SMARCE1-202ENST00000348513 MAGEA2P43356 314 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms