RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 STX5Q13190 355 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 PID1Q7Z2X4 250 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 RBM12BQ8IXT5 1001 aaKnown RBP10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 ZNF567Q8N184 647 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 PLD6Q8N2A8 252 aaKnown RBP10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 TRIML2Q8N7C3 387 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 RNF139Q8WU17 664 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 KIF12Q96FN5 646 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 SENP6Q9GZR1 1112 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 TASP1Q9H6P5 420 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 MINDY3Q9H8M7 445 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 PLEKHA5Q9HAU0 1116 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 LRRC4Q9HBW1 653 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 ZNF358Q9NW07 568 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 RSL24D1Q9UHA3 163 aaKnown RBP10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 MYO18AQ92614 2054 aaKnown RBP10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 PTPRFP10586 1907 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 ADCY6O43306 1168 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 PIGNO95427 931 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 HSPA1AP0DMV8 641 aaKnown RBP10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 HSPA1BP0DMV9 641 aaKnown RBP10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 IMPDH2P12268 514 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 TFEBP19484 476 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 MPSTP25325 297 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 GRIA4P48058 902 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 SULT2A1Q06520 285 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 FSTL1Q12841 308 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 PTK2BQ14289 1009 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 LY6KQ17RY6 165 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 SLC25A52Q3SY17 297 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 SH3D19Q5HYK7 790 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 NXNQ6DKJ4 435 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 IYDQ6PHW0 289 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 KCNMB4Q86W47 210 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 LRRC43Q8N309 656 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 CCDC185Q8N715 623 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 LRRC52Q8N7C0 313 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 DNAAF3Q8N9W5 541 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 TSPAN14Q8NG11 270 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 DIS3LQ8TF46 1054 aaKnown RBP10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 BIRC8Q96P09 236 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 CCT7Q99832 543 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 PKP2Q99959 881 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 CASS4Q9NQ75 786 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 FAM49BQ9NUQ9 324 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 HACL1Q9UJ83 578 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 TRHDEQ9UKU6 1024 aa10.3□□□□□ -0.76
TRAPPC6B-202ENST00000347691 SOWAHBA6NEL2 793 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 NEMP1O14524 444 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 SPATA31D3P0C874 917 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 SULT1E1P49888 294 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 ADARP55265 1226 aaKnown RBP10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 SLC12A1Q13621 1099 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 CEACAM7Q14002 265 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 DCAF4L1Q3SXM0 396 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 LBX2Q6XYB7 198 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 SPATA31D4Q6ZUB0 917 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 HM13Q8TCT9 377 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 VPS39Q96JC1 886 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 SPATA33Q96N06 139 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 VAT1Q99536 393 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 GPR22Q99680 433 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 PNPLA3Q9NST1 481 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 STAP1Q9ULZ2 295 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 A0A0G2JMZ2 1700 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 LRRC37A2A6NM11 1700 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 ARHGEF37A1IGU5 675 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 NPHS1O60500 1241 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 DAB1O75553 588 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 VAPBO95292 243 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 C8BP07358 591 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 CDK9P50750 372 aaKnown RBP10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 PPIL2Q13356 520 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 AMHR2Q16671 573 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 INTS6LQ5JSJ4 861 aaKnown RBP10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 NOL9Q5SY16 702 aaKnown RBP10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 C6orf52Q5T4I8 152 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 OLFML2BQ68BL8 750 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 APOBEC3FQ8IUX4 373 aaKnown RBP10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 TMEM102Q8N9M5 508 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 OR52K1Q8NGK4 314 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 CEP70Q8NHQ1 597 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 SCYL1Q96KG9 808 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 ZNF597Q96LX8 424 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 FCRL3Q96P31 734 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 OXCT2Q9BYC2 517 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 SNX25Q9H3E2 840 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 PRDM12Q9H4Q4 367 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 WDR55Q9H6Y2 383 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 SCAF8Q9UPN6 1271 aaKnown RBP10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 MYRFQ9Y2G1 1151 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 AP4S1Q9Y587 144 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 SNX9Q9Y5X1 595 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 ACOT8O14734 319 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 C22orf31O95567 290 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 EPHA3P29320 983 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 GRM5P41594 1212 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 NUP107P57740 925 aa10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 PPIDQ08752 370 aaKnown RBP10.29□□□□□ -0.76
TRAPPC6B-202ENST00000347691 PPP2R5DQ14738 602 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms