RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 HIF1AQ16665 826 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 GPR158Q5T848 1215 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 ZNF697Q5TEC3 545 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 RNF43Q68DV7 783 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 TIGD7Q6NT04 549 aaPredicted RBP11.22□□□□□ -0.61
ECM1-201ENST00000346569 PPP1R21Q6ZMI0 780 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 ZNF534Q76KX8 674 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 GRASPQ7Z6J2 395 aaPredicted RBP11.22□□□□□ -0.61
ECM1-201ENST00000346569 SETD3Q86TU7 594 aaPredicted RBP11.22□□□□□ -0.61
ECM1-201ENST00000346569 PDIK1LQ8N165 341 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 CPXM2Q8N436 756 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 VN1R2Q8NFZ6 395 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 GDPD5Q8WTR4 605 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 ARHGEF2Q92974 986 aaKnown RBP11.22□□□□□ -0.61
ECM1-201ENST00000346569 TMA16Q96EY4 203 aaKnown RBP11.22□□□□□ -0.61
ECM1-201ENST00000346569 ZNF419Q96HQ0 510 aaPredicted RBP11.22□□□□□ -0.61
ECM1-201ENST00000346569 SIGLEC10Q96LC7 697 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 C9orf72Q96LT7 481 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 SERPINB12Q96P63 405 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 CDCA3Q99618 268 aaPredicted RBP11.22□□□□□ -0.61
ECM1-201ENST00000346569 WDR83Q9BRX9 315 aaKnown RBP11.22□□□□□ -0.61
ECM1-201ENST00000346569 LRRC4CQ9HCJ2 640 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 SAYSD1Q9NPB0 183 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 KLHL8Q9P2G9 620 aaPredicted RBP11.22□□□□□ -0.61
ECM1-201ENST00000346569 ZMYM5Q9UJ78 669 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 TEX264Q9Y6I9 313 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 SPTBN5Q9NRC6 3674 aaKnown RBP11.21□□□□□ -0.61
ECM1-201ENST00000346569 A0A1B0GVM2 712 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 E2F8A0AVK6 867 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 TCAF2A6NFQ2 919 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 RFXAPO00287 272 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 ZNF197O14709 1029 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 SUN1O94901 812 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 SHBGP04278 402 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 CKMP06732 381 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 MLNP12872 115 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 TCF3P15923 654 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 ACVRL1P37023 503 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 GRIA1P42261 906 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 NRIP1P48552 1158 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 GNA12Q03113 381 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 SYCP2LQ5T4T6 812 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 TTC39BQ5VTQ0 682 aaPredicted RBP11.21□□□□□ -0.61
ECM1-201ENST00000346569 ITPRIPL1Q6GPH6 555 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 LRRC8BQ6P9F7 803 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 TMEM184AQ6ZMB5 413 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 IGDCC3Q8IVU1 814 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 AGGF1Q8N302 714 aaeCLIP11.21□□□□□ -0.61
ECM1-201ENST00000346569 PDCD7Q8N8D1 485 aaKnown RBP11.21□□□□□ -0.61
ECM1-201ENST00000346569 OR2W6PQ8NHA6 318 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 USP13Q92995 863 aaPredicted RBP11.21□□□□□ -0.61
ECM1-201ENST00000346569 ZBTB9Q96C00 473 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 MRPL38Q96DV4 380 aaKnown RBP11.21□□□□□ -0.61
ECM1-201ENST00000346569 AGAP3Q96P47 875 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 FCRL5Q96RD9 977 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 ACE2Q9BYF1 805 aaPredicted RBP11.21□□□□□ -0.61
ECM1-201ENST00000346569 GBA3Q9H227 469 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 GLOD4Q9HC38 313 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 MED4Q9NPJ6 270 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 RBM22Q9NW64 420 aaKnown RBP eCLIP11.21□□□□□ -0.61
ECM1-201ENST00000346569 CFAP97Q9P2B7 532 aa11.21□□□□□ -0.61
ECM1-201ENST00000346569 LSM7Q9UK45 103 aaKnown RBP11.21□□□□□ -0.61
ECM1-201ENST00000346569 MYO18AQ92614 2054 aaKnown RBP11.2□□□□□ -0.62
ECM1-201ENST00000346569 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.2□□□□□ -0.62
ECM1-201ENST00000346569 A0A0D9SEW6 157 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 OPA1O60313 960 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 PRAMEF11O60813 436 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 AVILO75366 819 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 BANF1O75531 89 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 TCEA3O75764 348 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 AP2A1O95782 977 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 ABHD2P08910 425 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 TSHRP16473 764 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 NFKB1P19838 968 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 HOXD9P28356 352 aaPredicted RBP11.2□□□□□ -0.62
ECM1-201ENST00000346569 WEE1P30291 646 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 RENBPP51606 427 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 GPX6P59796 221 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 ZNF844Q08AG5 666 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 GPS2Q13227 327 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 ZNF177Q13360 481 aaPredicted RBP11.2□□□□□ -0.62
ECM1-201ENST00000346569 ANO4Q32M45 955 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 BBS9Q3SYG4 887 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 ARHGAP15Q53QZ3 475 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 MPP7Q5T2T1 576 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 DENND2CQ68D51 928 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 CXorf57Q6NSI4 855 aaKnown RBP11.2□□□□□ -0.62
ECM1-201ENST00000346569 ELMSAN1Q6PJG2 1045 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 OTOP3Q7RTS5 596 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 BBS7Q8IWZ6 715 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 KRT222Q8N1A0 295 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 C12orf76Q8N812 135 aaPredicted RBP11.2□□□□□ -0.62
ECM1-201ENST00000346569 OR7D4Q8NG98 312 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 RIN3Q8TB24 985 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 SH3RF2Q8TEC5 729 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 USP33Q8TEY7 942 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 PYROXD1Q8WU10 500 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 ARL8AQ96BM9 186 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 LRRC39Q96DD0 335 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 ALG14Q96F25 216 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms