RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 CYP2F1P24903 491 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 LHX1P48742 406 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 CACNB2Q08289 660 aaPredicted RBP19.65■□□□□ 0.74
HDAC4-201ENST00000345617 CSHL1Q14406 222 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 PDK4Q16654 411 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 SNX32Q86XE0 403 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 POMGNT2Q8NAT1 580 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 SUN5Q8TC36 379 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 GSDMCQ9BYG8 508 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 RHOBTB2Q9BYZ6 727 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 PCDHGA4Q9Y5G9 962 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 RGSL1A5PLK6 1076 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 PGRMC2O15173 223 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 WDR49Q8IV35 697 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 CLHC1Q8NHS4 586 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 FAM172AQ8WUF8 416 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 MTIF3Q9H2K0 278 aaKnown RBP19.65■□□□□ 0.74
HDAC4-201ENST00000345617 GMPPBQ9Y5P6 360 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 ZNF879B4DU55 563 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 GH1P01241 217 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 OLFML2AQ68BL7 652 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 PCYOX1Q9UHG3 505 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 UBQLN1Q9UMX0 589 aaKnown RBP19.65■□□□□ 0.74
HDAC4-201ENST00000345617 TTC7BQ86TV6 843 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 MEIOBQ8N635 442 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 VMP1Q96GC9 406 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 AXIN1O15169 862 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 BST2Q10589 180 aaKnown RBP19.65■□□□□ 0.74
HDAC4-201ENST00000345617 RAB43Q86YS6 212 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 ZNF540Q8NDQ6 660 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 TMEM159Q96B96 161 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 MRPL57Q9BQC6 102 aaKnown RBP19.65■□□□□ 0.74
HDAC4-201ENST00000345617 AAASQ9NRG9 546 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 ALKQ9UM73 1620 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 BBIP1A8MTZ0 92 aa19.64■□□□□ 0.74
HDAC4-201ENST00000345617 NOS1APO75052 506 aaPredicted RBP19.64■□□□□ 0.74
HDAC4-201ENST00000345617 CCNE2O96020 404 aa19.64■□□□□ 0.74
HDAC4-201ENST00000345617 ASS1P00966 412 aaKnown RBP19.64■□□□□ 0.74
HDAC4-201ENST00000345617 ANPEPP15144 967 aa19.64■□□□□ 0.74
HDAC4-201ENST00000345617 ZNF7P17097 686 aaPredicted RBP19.64■□□□□ 0.74
HDAC4-201ENST00000345617 ZC2HC1CQ53FD0 456 aaPredicted RBP19.64■□□□□ 0.74
HDAC4-201ENST00000345617 CKAP2Q8WWK9 683 aa19.64■□□□□ 0.74
HDAC4-201ENST00000345617 CRYL1Q9Y2S2 319 aa19.64■□□□□ 0.74
HDAC4-201ENST00000345617 ERICH5Q6P6B1 374 aa19.64■□□□□ 0.74
HDAC4-201ENST00000345617 SLC44A5Q8NCS7 719 aa19.64■□□□□ 0.74
HDAC4-201ENST00000345617 ANGPT4Q9Y264 503 aa19.64■□□□□ 0.74
HDAC4-201ENST00000345617 MAGI3Q5TCQ9 1506 aa19.64■□□□□ 0.74
HDAC4-201ENST00000345617 OGTO15294 1046 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 NR4A1P22736 598 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 MAPK9P45984 424 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 MKRN4PQ13434 485 aaPredicted RBP19.64■□□□□ 0.73
HDAC4-201ENST00000345617 EFR3AQ14156 821 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 MXRA8Q9BRK3 442 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 SEC22BO75396 215 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 TGDSO95455 350 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 TTI2Q6NXR4 508 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 ZSCAN18Q8TBC5 510 aaPredicted RBP19.64■□□□□ 0.73
HDAC4-201ENST00000345617 PNPLA8Q9NP80 782 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 LRRC4BQ9NT99 713 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 LEF1Q9UJU2 399 aaPredicted RBP19.64■□□□□ 0.73
HDAC4-201ENST00000345617 CDC40O60508 579 aaKnown RBP eCLIP19.64■□□□□ 0.73
HDAC4-201ENST00000345617 UGT2B11O75310 529 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 S100A3P33764 101 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 GRIA3P42263 894 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 GCLCP48506 637 aaPredicted RBP19.64■□□□□ 0.73
HDAC4-201ENST00000345617 LEMD2Q8NC56 503 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 SNRPB2P08579 225 aaKnown RBP19.64■□□□□ 0.73
HDAC4-201ENST00000345617 RPTNQ6XPR3 784 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 KATNAL2Q8IYT4 538 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 ZNF557Q8N988 423 aaPredicted RBP19.64■□□□□ 0.73
HDAC4-201ENST00000345617 SEMA4AQ9H3S1 761 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 SMURF2Q9HAU4 748 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 HIST1H2ABP04908 130 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 RPL10AP62906 217 aaKnown RBP19.64■□□□□ 0.73
HDAC4-201ENST00000345617 PYHIN1Q6K0P9 492 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 ZNF662Q6ZS27 426 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 HIST3H2AQ7L7L0 130 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 ZNF614Q8N883 585 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 HIST1H2ACQ93077 130 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 ADGRB3O60242 1522 aa19.64■□□□□ 0.73
HDAC4-201ENST00000345617 FAM196BA6NMK8 535 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 IGKV5-2P06315 115 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 SCN1BQ07699 218 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 SKIV2LQ15477 1246 aaKnown RBP19.63■□□□□ 0.73
HDAC4-201ENST00000345617 TAF5Q15542 800 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 HELQQ8TDG4 1101 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 USP7Q93009 1102 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 ABATP80404 500 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 HKDC1Q2TB90 917 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 APOC4-APOC2K7ER74 178 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 MPZL2O60487 215 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 APOC2P02655 101 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 THRBP10828 461 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 ELK3P41970 407 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 ZMYND11Q15326 602 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 SLC5A9Q2M3M2 681 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.63■□□□□ 0.73
HDAC4-201ENST00000345617 UMODL1Q5DID0 1318 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 A0A096LPK6 155 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 ERCC2P18074 760 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms