RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 TSPAN8P19075 237 aa12.43□□□□□ -0.42
TRIOBP-202ENST00000344404 ATP5F1P24539 256 aaPredicted RBP12.43□□□□□ -0.42
TRIOBP-202ENST00000344404 ARMC12Q5T9G4 340 aa12.43□□□□□ -0.42
TRIOBP-202ENST00000344404 EID3Q8N140 333 aa12.43□□□□□ -0.42
TRIOBP-202ENST00000344404 KLK6Q92876 244 aa12.43□□□□□ -0.42
TRIOBP-202ENST00000344404 RIT2Q99578 217 aa12.43□□□□□ -0.42
TRIOBP-202ENST00000344404 TMEM79Q9BSE2 394 aa12.43□□□□□ -0.42
TRIOBP-202ENST00000344404 PHTF1Q9UMS5 762 aa12.43□□□□□ -0.42
TRIOBP-202ENST00000344404 MYO3AQ8NEV4 1616 aa12.43□□□□□ -0.42
TRIOBP-202ENST00000344404 PNPLA7Q6ZV29 1317 aa12.43□□□□□ -0.42
TRIOBP-202ENST00000344404 GPR75-ASB3A0A0A6YYF3 556 aa12.43□□□□□ -0.42
TRIOBP-202ENST00000344404 GLRA3O75311 464 aa12.43□□□□□ -0.42
TRIOBP-202ENST00000344404 FARP2O94887 1054 aaPredicted RBP12.43□□□□□ -0.42
TRIOBP-202ENST00000344404 MPP3Q13368 585 aa12.43□□□□□ -0.42
TRIOBP-202ENST00000344404 BOLA3Q53S33 107 aa12.43□□□□□ -0.42
TRIOBP-202ENST00000344404 TMED8Q6PL24 325 aaPredicted RBP12.43□□□□□ -0.42
TRIOBP-202ENST00000344404 FBXO39Q8N4B4 442 aa12.43□□□□□ -0.42
TRIOBP-202ENST00000344404 ZNF655Q8N720 491 aaPredicted RBP12.43□□□□□ -0.42
TRIOBP-202ENST00000344404 CCSER1Q9C0I3 900 aa12.43□□□□□ -0.42
TRIOBP-202ENST00000344404 MCUBQ9NWR8 336 aa12.43□□□□□ -0.42
TRIOBP-202ENST00000344404 OSER1Q9NX31 292 aa12.43□□□□□ -0.42
TRIOBP-202ENST00000344404 TMEM114B3SHH9 223 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 MGRN1O60291 552 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 FGBP02675 491 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 HSD17B3P37058 310 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 AQP5P55064 265 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 TARBP2Q15633 366 aaKnown RBP12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 ALX1Q15699 326 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 TBCELQ5QJ74 424 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 NETO2Q8NC67 525 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 CYP2W1Q8TAV3 490 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 OSCP1Q8WVF1 389 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 RAD51AP1Q96B01 352 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 PPP1R16AQ96I34 528 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 HGH1Q9BTY7 390 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 UXTQ9UBK9 157 aaPredicted RBP12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 DAPK2Q9UIK4 370 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 FFAR3O14843 346 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 GPR42O15529 346 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 PSIP1O75475 530 aaKnown RBP12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 DBIP07108 87 aaKnown RBP12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 YBX3P16989 372 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 MAT2AP31153 395 aaKnown RBP12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 NEDD8Q15843 81 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 CFAP52Q8N1V2 620 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 TRIM63Q969Q1 353 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 FEM1CQ96JP0 617 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 TBC1D13Q9NVG8 400 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 PCDHA11Q9Y5I1 949 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 DDX3XO00571 662 aaKnown RBP eCLIP12.42□□□□□ -0.429e-11■■□□□ 12.7
TRIOBP-202ENST00000344404 LIN7AO14910 233 aaPredicted RBP12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 PIRTP0C851 137 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 SMIM10L2AP0DMW4 78 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 SMIM10L2BP0DMW5 78 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 COX7A2P14406 83 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 TBX2Q13207 712 aaPredicted RBP12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 IQSEC1Q6DN90 963 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 REPS2Q8NFH8 660 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 ZIM3Q96PE6 472 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 KCND2Q9NZV8 630 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 TAF4O00268 1085 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 CLDN5O00501 218 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 CYP11B1P15538 503 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 RPA3P35244 121 aaPredicted RBP12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 OASLQ15646 514 aaKnown RBP12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 KCNN2Q9H2S1 579 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 POMKQ9H5K3 350 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 CLDND1Q9NY35 253 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 ARIH1Q9Y4X5 557 aaPredicted RBP12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 A0A1W2PQC6 194 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 TPBGLP0DKB5 382 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 EIF4BP23588 611 aaKnown RBP12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 HOXC12P31275 282 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 PSMD8P48556 350 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 KIRREL3Q8IZU9 778 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 AGGF1Q8N302 714 aaeCLIP12.42□□□□□ -0.422e-15■■■■■ 40.5
TRIOBP-202ENST00000344404 ZNF563Q8TA94 476 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 BPIFA3Q9BQP9 254 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 SEMA4BQ9NPR2 832 aaPredicted RBP12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 UBA2Q9UBT2 640 aaPredicted RBP12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 RECQL4O94761 1208 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 SLURP2P0DP57 97 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 H2AFXP16104 143 aaPredicted RBP12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 NTSP30990 170 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 CRY1Q16526 586 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 NDUFA5Q16718 116 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 KLHL12Q53G59 568 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 RETSATQ6NUM9 610 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 ING3Q9NXR8 418 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 CCDC167Q9P0B6 97 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 PHF11Q9UIL8 331 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 ZNF222Q9UK12 451 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 CLEC4AQ9UMR7 237 aa12.42□□□□□ -0.42
TRIOBP-202ENST00000344404 TULP4Q9NRJ4 1543 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 CNTNAP5Q8WYK1 1306 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 A0A088AWK7 358 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 CDC40O60508 579 aaKnown RBP eCLIP12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 ZNF10P21506 573 aaPredicted RBP12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 SKP1P63208 163 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms