RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 SLC17A6Q9P2U8 582 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 USH1CQ9Y6N9 552 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 CEP290O15078 2479 aa18.98■□□□□ 0.63
HOXA9-201ENST00000343483 PLXNA3P51805 1871 aa18.98■□□□□ 0.63
HOXA9-201ENST00000343483 TANC1Q9C0D5 1861 aa18.98■□□□□ 0.63
HOXA9-201ENST00000343483 SLC12A8A0AV02 714 aa18.98■□□□□ 0.63
HOXA9-201ENST00000343483 POLBP06746 335 aa18.98■□□□□ 0.63
HOXA9-201ENST00000343483 ATF6P18850 670 aa18.98■□□□□ 0.63
HOXA9-201ENST00000343483 TRIP4Q15650 581 aaPredicted RBP18.98■□□□□ 0.63
HOXA9-201ENST00000343483 SNCBQ16143 134 aa18.98■□□□□ 0.63
HOXA9-201ENST00000343483 USP41Q3LFD5 358 aa18.98■□□□□ 0.63
HOXA9-201ENST00000343483 MROH9Q5TGP6 573 aa18.98■□□□□ 0.63
HOXA9-201ENST00000343483 KIAA1841Q6NSI8 718 aa18.98■□□□□ 0.63
HOXA9-201ENST00000343483 CYS1Q717R9 158 aa18.98■□□□□ 0.63
HOXA9-201ENST00000343483 OTOAQ7RTW8 1153 aa18.98■□□□□ 0.63
HOXA9-201ENST00000343483 CDKL2Q92772 493 aa18.98■□□□□ 0.63
HOXA9-201ENST00000343483 TTC17Q96AE7 1141 aa18.98■□□□□ 0.63
HOXA9-201ENST00000343483 VPS11Q9H270 941 aa18.98■□□□□ 0.63
HOXA9-201ENST00000343483 RPS6KL1Q9Y6S9 549 aa18.98■□□□□ 0.63
HOXA9-201ENST00000343483 OR1D2P34982 312 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 SLC18A2Q05940 514 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 SETDB1Q15047 1291 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 SPOUT1Q5T280 376 aaKnown RBP18.97■□□□□ 0.63
HOXA9-201ENST00000343483 SH2D5Q6ZV89 423 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 NECAB2Q7Z6G3 386 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 ATP6V0D2Q8N8Y2 350 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 ANKLE1Q8NAG6 615 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 ZNF419Q96HQ0 510 aaPredicted RBP18.97■□□□□ 0.63
HOXA9-201ENST00000343483 BTN2A3PQ96KV6 586 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 CCSER2Q9H7U1 834 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 LRRC40Q9H9A6 602 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 CASS4Q9NQ75 786 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 IL1RAPL1Q9NZN1 696 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 SLC38A8A6NNN8 435 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 MATN3O15232 486 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 MGRN1O60291 552 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 PAPOLAP51003 745 aaKnown RBP18.97■□□□□ 0.63
HOXA9-201ENST00000343483 NEK3P51956 506 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 CNKSR3Q6P9H4 555 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 ZNF276Q8N554 614 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 SPATA22Q8NHS9 363 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 KLHL29Q96CT2 875 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 MTBPQ96DY7 904 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 VN1R3Q9BXE9 311 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 ZYG11BQ9C0D3 744 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 IQCGQ9H095 443 aaKnown RBP18.97■□□□□ 0.63
HOXA9-201ENST00000343483 C11orf49Q9H6J7 331 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 CWH43Q9H720 699 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 TMEM39AQ9NV64 488 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 MTRRQ9UBK8 725 aa18.97■□□□□ 0.63
HOXA9-201ENST00000343483 COPEO14579 308 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 TLR5O60602 858 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 NQO1P15559 274 aaKnown RBP18.96■□□□□ 0.63
HOXA9-201ENST00000343483 ALDH3A1P30838 453 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 KCNJ2P63252 427 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 NIPAL4Q0D2K0 466 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 CERCAMQ5T4B2 595 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 FYB2Q5VWT5 728 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 AFMIDQ63HM1 303 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 ICE2Q659A1 982 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 RAP1GAP2Q684P5 730 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 SLC8B1Q6J4K2 584 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 TIGD7Q6NT04 549 aaPredicted RBP18.96■□□□□ 0.63
HOXA9-201ENST00000343483 FAM117BQ6P1L5 589 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 TMCO2Q7Z6W1 182 aaPredicted RBP18.96■□□□□ 0.63
HOXA9-201ENST00000343483 RASSF3Q86WH2 238 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 C10orf82Q8WW14 230 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 IGSF21Q96ID5 467 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 FAM111AQ96PZ2 611 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 MYLK2Q9H1R3 596 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 MANSC1Q9H8J5 431 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 ALG13Q9NP73 1137 aaKnown RBP18.96■□□□□ 0.63
HOXA9-201ENST00000343483 TBX21Q9UL17 535 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 ATP9BO43861 1147 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 NEBLO76041 1014 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 ERVK-10P10266 1014 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 TPH1P17752 444 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 SERPINB9P50453 376 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 LRRC26Q2I0M4 334 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 NAPEPLDQ6IQ20 393 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 MARK2Q7KZI7 788 aaKnown RBP18.96■□□□□ 0.63
HOXA9-201ENST00000343483 ZNF683Q8IZ20 524 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 ZNF669Q96BR6 464 aaPredicted RBP18.96■□□□□ 0.63
HOXA9-201ENST00000343483 PRDM5Q9NQX1 630 aaPredicted RBP18.96■□□□□ 0.63
HOXA9-201ENST00000343483 COMMD8Q9NX08 183 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 ZFATQ9P243 1243 aa18.96■□□□□ 0.63
HOXA9-201ENST00000343483 NUP205Q92621 2012 aa18.95■□□□□ 0.62
HOXA9-201ENST00000343483 LAMA3Q16787 3333 aa18.95■□□□□ 0.62
HOXA9-201ENST00000343483 HMX2A2RU54 273 aa18.95■□□□□ 0.62
HOXA9-201ENST00000343483 WASH4PA8MWX3 477 aa18.95■□□□□ 0.62
HOXA9-201ENST00000343483 RFPL1O75677 317 aa18.95■□□□□ 0.62
HOXA9-201ENST00000343483 DCTN3O75935 186 aa18.95■□□□□ 0.62
HOXA9-201ENST00000343483 CNTN5O94779 1100 aa18.95■□□□□ 0.62
HOXA9-201ENST00000343483 MT-CYBP00156 380 aaPredicted RBP18.95■□□□□ 0.62
HOXA9-201ENST00000343483 RHOQP17081 205 aa18.95■□□□□ 0.62
HOXA9-201ENST00000343483 MLLT1Q03111 559 aaPredicted RBP18.95■□□□□ 0.62
HOXA9-201ENST00000343483 ALFQ53S48 1182 aa18.95■□□□□ 0.62
HOXA9-201ENST00000343483 SPANXN3Q5MJ09 141 aa18.95■□□□□ 0.62
HOXA9-201ENST00000343483 ERP27Q96DN0 273 aa18.95■□□□□ 0.62
HOXA9-201ENST00000343483 FCRL3Q96P31 734 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms