RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 GIT2Q14161 759 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 STRIP1Q5VSL9 837 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 ZNF425Q6IV72 752 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 CEP97Q8IW35 865 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 TOR3AQ9H497 397 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 RASSF1Q9NS23 344 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 NRBP2Q9NSY0 501 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 NIP7Q9Y221 180 aaKnown RBP eCLIP6.26□□□□□ -1.41
VCAN-203ENST00000343200 PADI2Q9Y2J8 665 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 DMRT2Q9Y5R5 561 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 EXPH5Q8NEV8 1989 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 PDE2AO00408 941 aaPredicted RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 FBP2O00757 339 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 FGRP09769 529 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 PORP16435 677 aaPredicted RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 GJA1P17302 382 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 NFKB1P19838 968 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 PTPN7P35236 360 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 ADAM8P78325 824 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 CACNB1Q02641 598 aaPredicted RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 CYP2U1Q7Z449 544 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 ABI1Q8IZP0 508 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 TPCN2Q8NHX9 752 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 RP9Q8TA86 221 aaKnown RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 TCEAL4Q96EI5 215 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 APOL5Q9BWW9 433 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 INO80BQ9C086 356 aaPredicted RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 ANKHQ9HCJ1 492 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 KLHL28Q9NXS3 571 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 SAMD4AQ9UPU9 718 aaKnown RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 GPATCH8Q9UKJ3 1502 aaKnown RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 CPA3P15088 417 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 NEK3P51956 506 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 SLC5A3P53794 718 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 BNIP2Q12982 314 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 MAB21L1Q13394 359 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 LRRC41Q15345 812 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 AKAP4Q5JQC9 854 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 BRSK2Q8IWQ3 736 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 TERB2Q8NHR7 220 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 PHF10Q8WUB8 498 aaKnown RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 GPRASP2Q96D09 838 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 PAFAH2Q99487 392 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 LIMD1Q9UGP4 676 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 GMPPBQ9Y5P6 360 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 THADAQ6YHU6 1953 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 PNMA6EA0A0J9YXQ4 647 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 ILVBLA1L0T0 632 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 WASLO00401 505 aaPredicted RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 UGT2B11O75310 529 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 SERPINE1P05121 402 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 CYP2C8P10632 490 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 OGNP20774 298 aaKnown RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 NMT1P30419 496 aaKnown RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 KCNJ2P63252 427 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 SNAP47Q5SQN1 464 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 TPTE2Q6XPS3 522 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 SATL1Q86VE3 508 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 ERI1Q8IV48 349 aaKnown RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 ZNF283Q8N7M2 679 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 TBCKQ8TEA7 893 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 AENQ8WTP8 325 aaKnown RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 NACC2Q96BF6 587 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.25□□□□□ -1.41
VCAN-203ENST00000343200 MTMR10Q9NXD2 777 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 TBC1D30Q9Y2I9 924 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 AP4B1Q9Y6B7 739 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 MADDQ8WXG6 1647 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 PCDH15Q96QU1 1955 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 EDC4Q6P2E9 1401 aaKnown RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 IFNA6P05013 189 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 MPOP05164 745 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 SERPINA6P08185 405 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 RALAP11233 206 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 HSD3B2P26439 372 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 STAT3P40763 770 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 RAB5CP51148 216 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 CYP24A1Q07973 514 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 GPR158Q5T848 1215 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 FAM92BQ6ZTR7 304 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 FAM160B2Q86V87 743 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 FBXO11Q86XK2 927 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 BAP1Q92560 729 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 MKL1Q969V6 931 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 C9orf72Q96LT7 481 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 CELF4Q9BZC1 486 aaKnown RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 BHLHE41Q9C0J9 482 aaPredicted RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 PAK6Q9NQU5 681 aaPredicted RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 MAP3K4Q9Y6R4 1608 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 MROH2AA6NES4 1674 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 A0A087X0T9 212 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 M0QYV0 167 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 CES2O00748 559 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 GATBO75879 557 aaKnown RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 GYPCP04921 128 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 PLD1Q13393 1074 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 KYAT1Q16773 422 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 HIST2H2ACQ16777 129 aaPredicted RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 PARP6Q2NL67 630 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 ATAD3CQ5T2N8 411 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms