RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 ZNF70Q9UC06 446 aaPredicted RBP9.85□□□□□ -0.83
HOXA1-201ENST00000343060 CLEC11AQ9Y240 323 aa9.85□□□□□ -0.83
HOXA1-201ENST00000343060 COQ6Q9Y2Z9 468 aa9.85□□□□□ -0.83
HOXA1-201ENST00000343060 COPG1Q9Y678 874 aaKnown RBP9.85□□□□□ -0.83
HOXA1-201ENST00000343060 NEMP1O14524 444 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 COL6A2P12110 1019 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 BMP2P12643 396 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 CYP3A5P20815 502 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 MYF6P23409 242 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 BCAP31P51572 246 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 SLC5A3P53794 718 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 PSME3P61289 254 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 PPIL2Q13356 520 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 BAATQ14032 418 aaPredicted RBP9.84□□□□□ -0.83
HOXA1-201ENST00000343060 SLC27A3Q5K4L6 730 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 LIPMQ5VYY2 423 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 HEATR6Q6AI08 1181 aaKnown RBP9.84□□□□□ -0.83
HOXA1-201ENST00000343060 OLFML1Q6UWY5 402 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 ZBTB33Q86T24 672 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 CNKSR2Q8WXI2 1034 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 UNC93B1Q9H1C4 597 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 RPF2Q9H7B2 306 aaKnown RBP9.84□□□□□ -0.83
HOXA1-201ENST00000343060 CYP3A43Q9HB55 503 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 NMRAL1Q9HBL8 299 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 HESX1Q9UBX0 185 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 CNOT6Q9ULM6 557 aaKnown RBP9.84□□□□□ -0.83
HOXA1-201ENST00000343060 A0A096LPK6 155 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 KDM4FA0A1W2PPD8 638 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 SPATA31C2B4DYI2 1134 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 PAPSS1O43252 624 aaPredicted RBP9.84□□□□□ -0.83
HOXA1-201ENST00000343060 AKAP10O43572 662 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 ZNF189O75820 626 aaPredicted RBP9.84□□□□□ -0.83
HOXA1-201ENST00000343060 ATE1O95260 518 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 ERVK-10P10266 1014 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 TFEBP19484 476 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 CDH8P55286 799 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 CDH15P55291 814 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 IRF9Q00978 393 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 GALNT2Q10471 571 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 ORC1Q13415 861 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 FKBP1CQ5VVH2 108 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 TMEM198Q66K66 360 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 GRAMD4Q6IC98 578 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 OR6B2Q6IFH4 312 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 ZNF354CQ86Y25 554 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 HERC6Q8IVU3 1022 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 MYO1HQ8N1T3 1032 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 PELI3Q8N2H9 469 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 TMEM151AQ8N4L1 468 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 FAM47BQ8NA70 645 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 ZNF526Q8TF50 670 aaPredicted RBP9.84□□□□□ -0.83
HOXA1-201ENST00000343060 HTR3CQ8WXA8 447 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 ABHD8Q96I13 439 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 PLEKHA8Q96JA3 519 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 DTLQ9NZJ0 730 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 GNPTGQ9UJJ9 305 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 TMED5Q9Y3A6 229 aa9.84□□□□□ -0.83
HOXA1-201ENST00000343060 IGKV6D-21A0A0A0MT36 114 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 H3BMQ9 156 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 FBP2O00757 339 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 CABYRO75952 493 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 PIGNO95427 931 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 FUCA1P04066 466 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 POLBP06746 335 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 PFKMP08237 780 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 SBK3P0C264 359 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 MCF2P10911 925 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 HALP42357 657 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 CCR3P51677 355 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 CSE1LP55060 971 aaKnown RBP9.83□□□□□ -0.84
HOXA1-201ENST00000343060 SESN2P58004 480 aaPredicted RBP9.83□□□□□ -0.84
HOXA1-201ENST00000343060 ARL13AQ5H913 290 aaPredicted RBP9.83□□□□□ -0.84
HOXA1-201ENST00000343060 TREML2Q5T2D2 321 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 INTS11Q5TA45 600 aaKnown RBP9.83□□□□□ -0.84
HOXA1-201ENST00000343060 NCBP2-AS2Q69YL0 99 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 FSTL4Q6MZW2 842 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 LCLAT1Q6UWP7 414 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 LSMEM2Q8N112 164 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 CXorf38Q8TB03 319 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 ADAM32Q8TC27 787 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 KHSRPQ92945 711 aaKnown RBP eCLIP9.83□□□□□ -0.84
HOXA1-201ENST00000343060 CNDP2Q96KP4 475 aaKnown RBP9.83□□□□□ -0.84
HOXA1-201ENST00000343060 COG8Q96MW5 612 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 AGAP3Q96P47 875 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 NPAS2Q99743 824 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 NEURL2Q9BR09 285 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 C11orf84Q9BUA3 381 aaPredicted RBP9.83□□□□□ -0.84
HOXA1-201ENST00000343060 NPLQ9BXD5 320 aaPredicted RBP9.83□□□□□ -0.84
HOXA1-201ENST00000343060 C1QTNF1Q9BXJ1 281 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 SEMA6AQ9H2E6 1030 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 NGRNQ9NPE2 291 aaKnown RBP9.83□□□□□ -0.84
HOXA1-201ENST00000343060 ZNF302Q9NR11 478 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 MRGBPQ9NV56 204 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 ARMC1Q9NVT9 282 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 TMEM9Q9P0T7 183 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 CD300AQ9UGN4 299 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 PGAP2Q9UHJ9 254 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 CDC14AQ9UNH5 594 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 USP3Q9Y6I4 520 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 TRIM43BA6NCK2 446 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms