RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 ATXN3P54252 364 aaPredicted RBP18.84■□□□□ 0.61
SMPD1-201ENST00000342245 PSME3P61289 254 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 OGDHQ02218 1023 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 NOMO1Q15155 1222 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 SEL1L3Q68CR1 1132 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 ZNF773Q6PK81 442 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 MTG1Q9BT17 334 aaPredicted RBP18.84■□□□□ 0.61
SMPD1-201ENST00000342245 MOCS1Q9NZB8 636 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 TANC1Q9C0D5 1861 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 WDR64B1ANS9 1081 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 KRT6AP02538 564 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 ALDOAP04075 364 aaKnown RBP18.84■□□□□ 0.61
SMPD1-201ENST00000342245 KRT6BP04259 564 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 HSPA1AP0DMV8 641 aaKnown RBP18.84■□□□□ 0.61
SMPD1-201ENST00000342245 HSPA1BP0DMV9 641 aaKnown RBP18.84■□□□□ 0.61
SMPD1-201ENST00000342245 TBXAS1P24557 533 aaPredicted RBP18.84■□□□□ 0.61
SMPD1-201ENST00000342245 PERM1Q5SV97 790 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 CCNYL2Q5T2Q4 361 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 C14orf80Q86SX3 495 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 SUN5Q8TC36 379 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 TMA16Q96EY4 203 aaKnown RBP18.84■□□□□ 0.61
SMPD1-201ENST00000342245 FAR2Q96K12 515 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 GLT1D1Q96MS3 346 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 ACO2Q99798 780 aaKnown RBP18.84■□□□□ 0.61
SMPD1-201ENST00000342245 BEGAINQ9BUH8 593 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 WDR18Q9BV38 432 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 TEKT3Q9BXF9 490 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 SP140LQ9H930 580 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 GPRC5CQ9NQ84 441 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 MID2Q9UJV3 735 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 ANGPTL3Q9Y5C1 460 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 PCDHGA11Q9Y5H2 935 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 CFHP08603 1231 aa18.83■□□□□ 0.61
SMPD1-201ENST00000342245 MAGEA3P43357 314 aa18.83■□□□□ 0.61
SMPD1-201ENST00000342245 CUL2Q13617 745 aa18.83■□□□□ 0.61
SMPD1-201ENST00000342245 SNX17Q15036 470 aa18.83■□□□□ 0.61
SMPD1-201ENST00000342245 MAPRE2Q15555 327 aa18.83■□□□□ 0.61
SMPD1-201ENST00000342245 KIAA2013Q8IYS2 634 aa18.83■□□□□ 0.61
SMPD1-201ENST00000342245 KCTD6Q8NC69 237 aa18.83■□□□□ 0.61
SMPD1-201ENST00000342245 ERLEC1Q96DZ1 483 aa18.83■□□□□ 0.61
SMPD1-201ENST00000342245 MARCH7Q9H992 704 aa18.83■□□□□ 0.61
SMPD1-201ENST00000342245 DNMT3BQ9UBC3 853 aaKnown RBP18.83■□□□□ 0.61
SMPD1-201ENST00000342245 NARFQ9UHQ1 456 aa18.83■□□□□ 0.61
SMPD1-201ENST00000342245 TLL2Q9Y6L7 1015 aa18.83■□□□□ 0.61
SMPD1-201ENST00000342245 IDH3BO43837 385 aa18.83■□□□□ 0.6
SMPD1-201ENST00000342245 STAM2O75886 525 aa18.83■□□□□ 0.6
SMPD1-201ENST00000342245 NCAM1P13591 858 aa18.83■□□□□ 0.6
SMPD1-201ENST00000342245 KCNA2P16389 499 aa18.83■□□□□ 0.6
SMPD1-201ENST00000342245 TCN1P20061 433 aaPredicted RBP18.83■□□□□ 0.6
SMPD1-201ENST00000342245 MATN1P21941 496 aa18.83■□□□□ 0.6
SMPD1-201ENST00000342245 PRKAA2P54646 552 aa18.83■□□□□ 0.6
SMPD1-201ENST00000342245 STX5Q13190 355 aa18.83■□□□□ 0.6
SMPD1-201ENST00000342245 NEDD8Q15843 81 aa18.83■□□□□ 0.6
SMPD1-201ENST00000342245 GRIK5Q16478 980 aa18.83■□□□□ 0.6
SMPD1-201ENST00000342245 FER1L6Q2WGJ9 1857 aa18.83■□□□□ 0.6
SMPD1-201ENST00000342245 ATAD3BQ5T9A4 648 aa18.83■□□□□ 0.6
SMPD1-201ENST00000342245 PRR23CQ6ZRP0 262 aa18.83■□□□□ 0.6
SMPD1-201ENST00000342245 GALNT13Q8IUC8 556 aa18.83■□□□□ 0.6
SMPD1-201ENST00000342245 MAP4K3Q8IVH8 894 aa18.83■□□□□ 0.6
SMPD1-201ENST00000342245 MAPK15Q8TD08 544 aa18.83■□□□□ 0.6
SMPD1-201ENST00000342245 RASSF5Q8WWW0 418 aa18.83■□□□□ 0.6
SMPD1-201ENST00000342245 RNPEPQ9H4A4 650 aa18.83■□□□□ 0.6
SMPD1-201ENST00000342245 SARDHQ9UL12 918 aa18.83■□□□□ 0.6
SMPD1-201ENST00000342245 RAP2CQ9Y3L5 183 aa18.83■□□□□ 0.6
SMPD1-201ENST00000342245 ST14Q9Y5Y6 855 aa18.83■□□□□ 0.6
SMPD1-201ENST00000342245 CNTNAP4Q9C0A0 1308 aa18.83■□□□□ 0.6
SMPD1-201ENST00000342245 TESPA1A2RU30 521 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-201ENST00000342245 STX16-NPEPL1H3BU86 382 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 PHGDHO43175 533 aaKnown RBP18.82■□□□□ 0.6
SMPD1-201ENST00000342245 GNAO1P09471 354 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 CKMT2P17540 419 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 PSMA2P25787 234 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 RPL10P27635 214 aaKnown RBP18.82■□□□□ 0.6
SMPD1-201ENST00000342245 TM4SF1P30408 202 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 GARSP41250 739 aaKnown RBP18.82■□□□□ 0.6
SMPD1-201ENST00000342245 QARSP47897 775 aaKnown RBP18.82■□□□□ 0.6
SMPD1-201ENST00000342245 TRIM32Q13049 653 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 TFDP2Q14188 446 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 ZNF394Q53GI3 561 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 IQSEC1Q6DN90 963 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 TMEM270Q6UE05 265 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 TFAP2DQ7Z6R9 452 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 GOLM1Q8NBJ4 401 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 TMEM35BQ8NCS4 154 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 ZNF280CQ8ND82 737 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 LPGAT1Q92604 370 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 TP63Q9H3D4 680 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-201ENST00000342245 EHMT1Q9H9B1 1298 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 XPNPEP3Q9NQH7 507 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 TBX20Q9UMR3 447 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 CDYLQ9Y232 598 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 TRIM24O15164 1050 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 ASNA1O43681 348 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 SCO2O43819 266 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 ALDH1A2O94788 518 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 PRKCGP05129 697 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 AASDHQ4L235 1098 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-201ENST00000342245 TRMT10BQ6PF06 316 aaKnown RBP18.82■□□□□ 0.6
SMPD1-201ENST00000342245 CLEC10AQ8IUN9 316 aa18.82■□□□□ 0.6
SMPD1-201ENST00000342245 GPD1LQ8N335 351 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms