RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 SPON2Q9BUD6 331 aa20.67■□□□□ 0.9
SYNE2-201ENST00000341472 SELENOOQ9BVL4 669 aa20.67■□□□□ 0.9
SYNE2-201ENST00000341472 ZYG11BQ9C0D3 744 aa20.67■□□□□ 0.9
SYNE2-201ENST00000341472 IL21RQ9HBE5 538 aa20.67■□□□□ 0.9
SYNE2-201ENST00000341472 PPM1HQ9ULR3 514 aa20.67■□□□□ 0.9
SYNE2-201ENST00000341472 HS3ST2Q9Y278 367 aa20.67■□□□□ 0.9
SYNE2-201ENST00000341472 FARP1Q9Y4F1 1045 aaPredicted RBP20.67■□□□□ 0.9
SYNE2-201ENST00000341472 PCDHB9Q9Y5E1 797 aa20.67■□□□□ 0.9
SYNE2-201ENST00000341472 EPG5Q9HCE0 2579 aa20.66■□□□□ 0.9
SYNE2-201ENST00000341472 A0A0D9SEW6 157 aa20.66■□□□□ 0.9
SYNE2-201ENST00000341472 A0A1W2PPC4 97 aa20.66■□□□□ 0.9
SYNE2-201ENST00000341472 ILVBLA1L0T0 632 aa20.66■□□□□ 0.9
SYNE2-201ENST00000341472 BNIP3LO60238 219 aa20.66■□□□□ 0.9
SYNE2-201ENST00000341472 GJB6O95452 261 aa20.66■□□□□ 0.9
SYNE2-201ENST00000341472 FERP16591 822 aa20.66■□□□□ 0.9
SYNE2-201ENST00000341472 RFC1P35251 1148 aaPredicted RBP20.66■□□□□ 0.9
SYNE2-201ENST00000341472 PTPN9P43378 593 aa20.66■□□□□ 0.9
SYNE2-201ENST00000341472 CCR5P51681 352 aa20.66■□□□□ 0.9
SYNE2-201ENST00000341472 FILIP1LQ4L180 1135 aa20.66■□□□□ 0.9
SYNE2-201ENST00000341472 CAVIN1Q6NZI2 390 aaKnown RBP20.66■□□□□ 0.9
SYNE2-201ENST00000341472 ZNF783Q6ZMS7 281 aa20.66■□□□□ 0.9
SYNE2-201ENST00000341472 STRADAQ7RTN6 431 aa20.66■□□□□ 0.9
SYNE2-201ENST00000341472 ORAI3Q9BRQ5 295 aa20.66■□□□□ 0.9
SYNE2-201ENST00000341472 OSBPL2Q9H1P3 480 aa20.66■□□□□ 0.9
SYNE2-201ENST00000341472 RTN4Q9NQC3 1192 aaKnown RBP20.66■□□□□ 0.9
SYNE2-201ENST00000341472 PPARGC1AQ9UBK2 798 aaKnown RBP20.66■□□□□ 0.9
SYNE2-201ENST00000341472 OR12D3Q9UGF7 316 aa20.66■□□□□ 0.9
SYNE2-201ENST00000341472 VPS51Q9UID3 782 aa20.66■□□□□ 0.9
SYNE2-201ENST00000341472 ANKRD6Q9Y2G4 727 aa20.66■□□□□ 0.9
SYNE2-201ENST00000341472 KNL1Q8NG31 2342 aa20.66■□□□□ 0.9
SYNE2-201ENST00000341472 CEP295Q9C0D2 2601 aa20.66■□□□□ 0.9
SYNE2-201ENST00000341472 TBC1D3DA0A087WVF3 549 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 TBC1D3IA0A087WXS9 549 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 TBC1D3EA0A087X179 549 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 TBC1D3KA0A087X1G2 549 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 TBC1D3FA6NER0 549 aaPredicted RBP20.65■□□□□ 0.9
SYNE2-201ENST00000341472 SIGLEC16A6NMB1 481 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 TBC1D3LB9A6J9 549 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 C1QTNF3-AMACRE9PGA6 284 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 ALOX15BO15296 676 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 TEX33O43247 280 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 TBC1D3HP0C7X1 549 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 ZNF883P0CG24 379 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 SRCP12931 536 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 GRIA4P48058 902 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 RACK1P63244 317 aaKnown RBP20.65■□□□□ 0.9
SYNE2-201ENST00000341472 RAB6CQ53S08 254 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 ARTNQ5T4W7 220 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 TBC1D3GQ6DHY5 549 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 TBC1D3CQ6IPX1 549 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 Q6ZVU0 165 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 ADAT2Q7Z6V5 191 aaKnown RBP20.65■□□□□ 0.9
SYNE2-201ENST00000341472 TBC1D3Q8IZP1 549 aaPredicted RBP20.65■□□□□ 0.9
SYNE2-201ENST00000341472 DCAF4L2Q8NA75 395 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 OR7D4Q8NG98 312 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 CENPIQ92674 756 aaPredicted RBP20.65■□□□□ 0.9
SYNE2-201ENST00000341472 SKA1Q96BD8 255 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 CAMK1GQ96NX5 476 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 RAB6CQ9H0N0 254 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 TM7SF3Q9NS93 570 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 SARDHQ9UL12 918 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 TPX2Q9ULW0 747 aaKnown RBP20.65■□□□□ 0.9
SYNE2-201ENST00000341472 SNX11Q9Y5W9 270 aa20.65■□□□□ 0.9
SYNE2-201ENST00000341472 K7ERQ8 282 aa20.64■□□□□ 0.89
SYNE2-201ENST00000341472 TNFAIP3P21580 790 aa20.64■□□□□ 0.89
SYNE2-201ENST00000341472 DRD3P35462 400 aa20.64■□□□□ 0.89
SYNE2-201ENST00000341472 ZNF165P49910 485 aa20.64■□□□□ 0.89
SYNE2-201ENST00000341472 CLCN6P51797 869 aa20.64■□□□□ 0.89
SYNE2-201ENST00000341472 ADPRHP54922 357 aa20.64■□□□□ 0.89
SYNE2-201ENST00000341472 FAM193AP78312 1265 aa20.64■□□□□ 0.89
SYNE2-201ENST00000341472 C1QBPQ07021 282 aaKnown RBP20.64■□□□□ 0.89
SYNE2-201ENST00000341472 SLC20A2Q08357 652 aa20.64■□□□□ 0.89
SYNE2-201ENST00000341472 SUZ12Q15022 739 aaKnown RBP20.64■□□□□ 0.89
SYNE2-201ENST00000341472 TRIP6Q15654 476 aaKnown RBP20.64■□□□□ 0.89
SYNE2-201ENST00000341472 RETSATQ6NUM9 610 aa20.64■□□□□ 0.89
SYNE2-201ENST00000341472 WDR59Q6PJI9 974 aa20.64■□□□□ 0.89
SYNE2-201ENST00000341472 IRF2BP2Q7Z5L9 587 aa20.64■□□□□ 0.89
SYNE2-201ENST00000341472 NAXDQ8IW45 347 aa20.64■□□□□ 0.89
SYNE2-201ENST00000341472 C3orf20Q8ND61 904 aa20.64■□□□□ 0.89
SYNE2-201ENST00000341472 PIP4K2CQ8TBX8 421 aa20.64■□□□□ 0.89
SYNE2-201ENST00000341472 SETD7Q8WTS6 366 aaKnown RBP20.64■□□□□ 0.89
SYNE2-201ENST00000341472 FAM172AQ8WUF8 416 aa20.64■□□□□ 0.89
SYNE2-201ENST00000341472 CCDC114Q96M63 670 aa20.64■□□□□ 0.89
SYNE2-201ENST00000341472 KDM4CQ9H3R0 1056 aa20.64■□□□□ 0.89
SYNE2-201ENST00000341472 MYO6Q9UM54 1294 aa20.64■□□□□ 0.89
SYNE2-201ENST00000341472 FNDC3AQ9Y2H6 1198 aaKnown RBP20.64■□□□□ 0.89
SYNE2-201ENST00000341472 PCDHGB2Q9Y5G2 931 aa20.64■□□□□ 0.89
SYNE2-201ENST00000341472 CBX4O00257 560 aa20.63■□□□□ 0.89
SYNE2-201ENST00000341472 KCNK3O14649 394 aa20.63■□□□□ 0.89
SYNE2-201ENST00000341472 SLC7A4O43246 635 aa20.63■□□□□ 0.89
SYNE2-201ENST00000341472 PLEKP08567 350 aaPredicted RBP20.63■□□□□ 0.89
SYNE2-201ENST00000341472 GPD1P21695 349 aa20.63■□□□□ 0.89
SYNE2-201ENST00000341472 RRM1P23921 792 aa20.63■□□□□ 0.89
SYNE2-201ENST00000341472 METAP1P53582 386 aa20.63■□□□□ 0.89
SYNE2-201ENST00000341472 GSCP56915 257 aaPredicted RBP20.63■□□□□ 0.89
SYNE2-201ENST00000341472 C21orf59P57076 290 aa20.63■□□□□ 0.89
SYNE2-201ENST00000341472 NRG1Q02297 640 aaPredicted RBP20.63■□□□□ 0.89
SYNE2-201ENST00000341472 GNA12Q03113 381 aa20.63■□□□□ 0.89
SYNE2-201ENST00000341472 ACAD10Q6JQN1 1059 aa20.63■□□□□ 0.89
SYNE2-201ENST00000341472 RWDD4Q6NW29 188 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms