RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 C4orf22Q6V702 233 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 TMC7Q7Z402 723 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 EXT2Q93063 718 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 UBE2OQ9C0C9 1292 aaKnown RBP14.67□□□□□ -0.06
CPSF7-201ENST00000340437 VPS33BQ9H267 617 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 ZDHHC2Q9UIJ5 367 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 GJD2Q9UKL4 321 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 SORCS3Q9UPU3 1222 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 SF3B1O75533 1304 aaKnown RBP eCLIP14.67□□□□□ -0.067e-6■■■■■ 28.7
CPSF7-201ENST00000340437 PTPN9P43378 593 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 SLC5A9Q2M3M2 681 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 ZNF484Q5JVG2 852 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 C9orf57Q5W0N0 161 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 BNC2Q6ZN30 1099 aaPredicted RBP14.67□□□□□ -0.06
CPSF7-201ENST00000340437 DENND6AQ8IWF6 608 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 PQLC1Q8N2U9 271 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 FAM192AQ9GZU8 254 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 CHST12Q9NRB3 414 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 MKS1Q9NXB0 559 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 DDX43Q9NXZ2 648 aaKnown RBP14.67□□□□□ -0.06
CPSF7-201ENST00000340437 PCDHB12Q9Y5F1 795 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 RTN3O95197 1032 aaPredicted RBP14.67□□□□□ -0.06
CPSF7-201ENST00000340437 VAPBO95292 243 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 CLPTM1O96005 669 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 USP17L7P0C7H9 530 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 MAGEA6P43360 314 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 PKDCCQ504Y2 493 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 RNF217Q8TC41 542 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 PPWD1Q96BP3 646 aaKnown RBP14.67□□□□□ -0.06
CPSF7-201ENST00000340437 OLFM3Q96PB7 478 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 IL1RL2Q9HB29 575 aa14.67□□□□□ -0.06
CPSF7-201ENST00000340437 FER1L6Q2WGJ9 1857 aa14.66□□□□□ -0.06
CPSF7-201ENST00000340437 GOLGA4Q13439 2230 aaKnown RBP14.66□□□□□ -0.06
CPSF7-201ENST00000340437 ZNF646O15015 1829 aaPredicted RBP14.66□□□□□ -0.06
CPSF7-201ENST00000340437 THRAP10827 490 aa14.66□□□□□ -0.06
CPSF7-201ENST00000340437 TFEBP19484 476 aa14.66□□□□□ -0.06
CPSF7-201ENST00000340437 PTPN3P26045 913 aa14.66□□□□□ -0.06
CPSF7-201ENST00000340437 MS4A2Q01362 244 aa14.66□□□□□ -0.06
CPSF7-201ENST00000340437 PAN2Q504Q3 1202 aaKnown RBP14.66□□□□□ -0.06
CPSF7-201ENST00000340437 EPGNQ6UW88 154 aa14.66□□□□□ -0.06
CPSF7-201ENST00000340437 PSTKQ8IV42 348 aaKnown RBP14.66□□□□□ -0.06
CPSF7-201ENST00000340437 SERPINI1Q99574 410 aa14.66□□□□□ -0.06
CPSF7-201ENST00000340437 EPAS1Q99814 870 aa14.66□□□□□ -0.06
CPSF7-201ENST00000340437 FTHL17Q9BXU8 183 aa14.66□□□□□ -0.06
CPSF7-201ENST00000340437 LZTS1Q9Y250 596 aa14.66□□□□□ -0.06
CPSF7-201ENST00000340437 ZNF195O14628 629 aa14.66□□□□□ -0.06
CPSF7-201ENST00000340437 XPO1O14980 1071 aaKnown RBP14.66□□□□□ -0.06
CPSF7-201ENST00000340437 MT-CYBP00156 380 aaPredicted RBP14.66□□□□□ -0.06
CPSF7-201ENST00000340437 MPP1Q00013 466 aa14.66□□□□□ -0.06
CPSF7-201ENST00000340437 PCSK7Q16549 785 aa14.66□□□□□ -0.06
CPSF7-201ENST00000340437 CCDC153Q494R4 210 aa14.66□□□□□ -0.06
CPSF7-201ENST00000340437 GK5Q6ZS86 529 aa14.66□□□□□ -0.06
CPSF7-201ENST00000340437 B4GALNT2Q8NHY0 566 aa14.66□□□□□ -0.06
CPSF7-201ENST00000340437 NAT14Q8WUY8 206 aa14.66□□□□□ -0.06
CPSF7-201ENST00000340437 HIC2Q96JB3 615 aa14.66□□□□□ -0.06
CPSF7-201ENST00000340437 ULBP1Q9BZM6 244 aa14.66□□□□□ -0.06
CPSF7-201ENST00000340437 PCDHAC1Q9H158 963 aa14.66□□□□□ -0.06
CPSF7-201ENST00000340437 NUDT5Q9UKK9 219 aa14.66□□□□□ -0.06
CPSF7-201ENST00000340437 MGAMO43451 1857 aa14.66□□□□□ -0.06
CPSF7-201ENST00000340437 G3V2L1 256 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 NRP1O14786 923 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 PMPCBO75439 489 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 ALDH1A2O94788 518 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 SLC25A52Q3SY17 297 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 ZNF354CQ86Y25 554 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 APLFQ8IW19 511 aaPredicted RBP14.65□□□□□ -0.06
CPSF7-201ENST00000340437 CEP70Q8NHQ1 597 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 RHOBTB2Q9BYZ6 727 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 WDR41Q9HAD4 459 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 IRAK4Q9NWZ3 460 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 STAP1Q9ULZ2 295 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 AP4B1Q9Y6B7 739 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 RPL14P50914 215 aaKnown RBP14.65□□□□□ -0.06
CPSF7-201ENST00000340437 LIMK2P53671 638 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 ARHGAP1Q07960 439 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 RALGDSQ12967 914 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 ZBTB17Q13105 803 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 DGKDQ16760 1214 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 C11orf91Q3C1V1 193 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 SPANXN3Q5MJ09 141 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 RARS2Q5T160 578 aaKnown RBP14.65□□□□□ -0.06
CPSF7-201ENST00000340437 WSCD1Q658N2 575 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 PGM2L1Q6PCE3 622 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 JADE3Q92613 823 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 TRPV6Q9H1D0 765 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 VRTNQ9H8Y1 702 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 ANLNQ9NQW6 1124 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 ATP6AP2A0A1C7CYW4 349 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 ATP6AP2O75787 350 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 CNMDO75829 334 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 HARS2P49590 506 aaKnown RBP14.65□□□□□ -0.06
CPSF7-201ENST00000340437 SLC26A2P50443 739 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 LRRC23Q53EV4 343 aaPredicted RBP14.65□□□□□ -0.06
CPSF7-201ENST00000340437 SH2D4BQ5SQS7 431 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 STEAP4Q687X5 459 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 ARHGAP18Q8N392 663 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 EME1Q96AY2 570 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 NXNL1Q96CM4 212 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 PHF21BQ96EK2 531 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 ELMO2Q96JJ3 720 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms