RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 UBALD2Q8IYN6 164 aa18.28■□□□□ 0.52
SDCBP2-201ENST00000339987 CCDC33Q8N5R6 958 aa18.28■□□□□ 0.52
SDCBP2-201ENST00000339987 TERB1Q8NA31 727 aa18.28■□□□□ 0.52
SDCBP2-201ENST00000339987 TFB1MQ8WVM0 346 aaKnown RBP18.28■□□□□ 0.52
SDCBP2-201ENST00000339987 C1orf54Q8WWF1 131 aa18.28■□□□□ 0.52
SDCBP2-201ENST00000339987 ATG4AQ8WYN0 398 aa18.28■□□□□ 0.52
SDCBP2-201ENST00000339987 TTC17Q96AE7 1141 aa18.28■□□□□ 0.52
SDCBP2-201ENST00000339987 ACDQ96AP0 544 aa18.28■□□□□ 0.52
SDCBP2-201ENST00000339987 P2RY13Q9BPV8 354 aa18.28■□□□□ 0.52
SDCBP2-201ENST00000339987 IPO11Q9UI26 975 aaKnown RBP18.28■□□□□ 0.52
SDCBP2-201ENST00000339987 HPCAL4Q9UM19 191 aa18.28■□□□□ 0.52
SDCBP2-201ENST00000339987 A0A0A0MRY4 1105 aa18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 ZSCAN5CA6NGD5 496 aaPredicted RBP18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 H7C0C1 242 aa18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 CCDC188H7C350 402 aa18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 TIMM44O43615 452 aa18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 PRAMEF11O60813 436 aa18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 GRIA2P42262 883 aa18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 ATP5OP48047 213 aa18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 SULT2A1Q06520 285 aa18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 IL10RBQ08334 325 aa18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 EIF4HQ15056 248 aaKnown RBP18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 OASLQ15646 514 aaKnown RBP18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 SLC44A4Q53GD3 710 aa18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 MBLAC2Q68D91 279 aa18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 NAIF1Q69YI7 327 aaPredicted RBP18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 TIGD7Q6NT04 549 aaPredicted RBP18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 ARHGAP36Q6ZRI8 547 aa18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 ZC3H18Q86VM9 953 aaKnown RBP18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 FAM118BQ9BPY3 351 aa18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 L2HGDHQ9H9P8 463 aa18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 SP110Q9HB58 689 aa18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 PDFQ9HBH1 243 aa18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 VPS51Q9UID3 782 aa18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 DNPEPQ9ULA0 475 aa18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 DRG1Q9Y295 367 aaKnown RBP18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 MIA3Q5JRA6 1907 aa18.27■□□□□ 0.52
SDCBP2-201ENST00000339987 BCLAF3A2AJT9 711 aaKnown RBP18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 PHF2O75151 1096 aa18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 KAT7O95251 611 aa18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 ASLP04424 464 aa18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 APODP05090 189 aa18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 POLR2EP19388 210 aaKnown RBP18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 GALK1P51570 392 aa18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 MESP2Q0VG99 397 aa18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 BYSLQ13895 437 aaKnown RBP18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 MLF2Q15773 248 aaPredicted RBP18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 TMEM215Q68D42 235 aa18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 TXNDC11Q6PKC3 985 aa18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 NUDT18Q6ZVK8 323 aa18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 ZNF354CQ86Y25 554 aa18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 CCDC13Q8IYE1 715 aa18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 CCNYQ8ND76 341 aa18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 MNS1Q8NEH6 495 aa18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 SPATA4Q8NEY3 305 aa18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 MAGOHBQ96A72 148 aaKnown RBP18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 ZNF599Q96NL3 588 aa18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 LGMNQ99538 433 aa18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 WNT16Q9UBV4 365 aa18.26■□□□□ 0.51
SDCBP2-201ENST00000339987 CFAP69A5D8W1 941 aa18.25■□□□□ 0.51
SDCBP2-201ENST00000339987 J3KR12 359 aa18.25■□□□□ 0.51
SDCBP2-201ENST00000339987 CBX4O00257 560 aa18.25■□□□□ 0.51
SDCBP2-201ENST00000339987 MTSS1O43312 755 aa18.25■□□□□ 0.51
SDCBP2-201ENST00000339987 SNAP91O60641 907 aa18.25■□□□□ 0.51
SDCBP2-201ENST00000339987 ITGAVP06756 1048 aa18.25■□□□□ 0.51
SDCBP2-201ENST00000339987 GLDCP23378 1020 aa18.25■□□□□ 0.51
SDCBP2-201ENST00000339987 CHRNA3P32297 505 aa18.25■□□□□ 0.51
SDCBP2-201ENST00000339987 FNTAP49354 379 aa18.25■□□□□ 0.51
SDCBP2-201ENST00000339987 VASPP50552 380 aaPredicted RBP18.25■□□□□ 0.51
SDCBP2-201ENST00000339987 GEMIN4P57678 1058 aaKnown RBP18.25■□□□□ 0.51
SDCBP2-201ENST00000339987 ARF5P84085 180 aa18.25■□□□□ 0.51
SDCBP2-201ENST00000339987 PRKCQQ04759 706 aa18.25■□□□□ 0.51
SDCBP2-201ENST00000339987 SLC20A2Q08357 652 aa18.25■□□□□ 0.51
SDCBP2-201ENST00000339987 AP1B1Q10567 949 aa18.25■□□□□ 0.51
SDCBP2-201ENST00000339987 TMEM196Q5HYL7 178 aa18.25■□□□□ 0.51
SDCBP2-201ENST00000339987 IER5LQ5T953 404 aa18.25■□□□□ 0.51
SDCBP2-201ENST00000339987 RETSATQ6NUM9 610 aa18.25■□□□□ 0.51
SDCBP2-201ENST00000339987 DARS2Q6PI48 645 aaKnown RBP18.25■□□□□ 0.51
SDCBP2-201ENST00000339987 MAML1Q92585 1016 aa18.25■□□□□ 0.51
SDCBP2-201ENST00000339987 CD320Q9NPF0 282 aa18.25■□□□□ 0.51
SDCBP2-201ENST00000339987 ELOVL2Q9NXB9 296 aa18.25■□□□□ 0.51
SDCBP2-201ENST00000339987 TBC1D3BA6NDS4 549 aa18.24■□□□□ 0.51
SDCBP2-201ENST00000339987 SHISA7A6NL88 538 aa18.24■□□□□ 0.51
SDCBP2-201ENST00000339987 PRRT4C9JH25 899 aa18.24■□□□□ 0.51
SDCBP2-201ENST00000339987 MAN2B1O00754 1011 aa18.24■□□□□ 0.51
SDCBP2-201ENST00000339987 MATN3O15232 486 aa18.24■□□□□ 0.51
SDCBP2-201ENST00000339987 PEX11BO96011 259 aa18.24■□□□□ 0.51
SDCBP2-201ENST00000339987 ATP5BP06576 529 aaKnown RBP18.24■□□□□ 0.51
SDCBP2-201ENST00000339987 VAV1P15498 845 aa18.24■□□□□ 0.51
SDCBP2-201ENST00000339987 COILP38432 576 aaPredicted RBP18.24■□□□□ 0.51
SDCBP2-201ENST00000339987 TNFRSF4P43489 277 aa18.24■□□□□ 0.51
SDCBP2-201ENST00000339987 ECT2LQ008S8 904 aa18.24■□□□□ 0.51
SDCBP2-201ENST00000339987 SNX1Q13596 522 aa18.24■□□□□ 0.51
SDCBP2-201ENST00000339987 TPRG1Q6ZUI0 275 aa18.24■□□□□ 0.51
SDCBP2-201ENST00000339987 CEP112Q8N8E3 955 aa18.24■□□□□ 0.51
SDCBP2-201ENST00000339987 CASKIN2Q8WXE0 1202 aa18.24■□□□□ 0.51
SDCBP2-201ENST00000339987 FBRSL1Q9HCM7 1045 aaKnown RBP18.24■□□□□ 0.51
SDCBP2-201ENST00000339987 RRAGDQ9NQL2 400 aaPredicted RBP18.24■□□□□ 0.51
SDCBP2-201ENST00000339987 ARHGEF3Q9NR81 526 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms