RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 FBXO39Q8N4B4 442 aa13.02□□□□□ -0.32
USP47-202ENST00000339865 ZNF366Q8N895 744 aa13.02□□□□□ -0.32
USP47-202ENST00000339865 ATP6V0D2Q8N8Y2 350 aa13.02□□□□□ -0.32
USP47-202ENST00000339865 LY9Q9HBG7 655 aa13.02□□□□□ -0.32
USP47-202ENST00000339865 NT5MQ9NPB1 228 aa13.02□□□□□ -0.32
USP47-202ENST00000339865 RNF146Q9NTX7 359 aa13.02□□□□□ -0.32
USP47-202ENST00000339865 OAS3Q9Y6K5 1087 aaKnown RBP13.02□□□□□ -0.32
USP47-202ENST00000339865 MAFKO60675 156 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 GYPCP04921 128 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 ALOX5P09917 674 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 FAM153BP0C7A2 387 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 PTPN9P43378 593 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 FMR1Q06787 632 aaKnown RBP eCLIP13.02□□□□□ -0.331e-9■■■■■ 27.7
USP47-202ENST00000339865 DEFB128Q7Z7B8 93 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 FATE1Q969F0 183 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 TRIM43Q96BQ3 446 aaPredicted RBP13.02□□□□□ -0.33
USP47-202ENST00000339865 USP18Q9UMW8 372 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 PSMD13Q9UNM6 376 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 ANKDD1BA6NHY2 528 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 FCHO1O14526 889 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 SLC16A3O15427 465 aaKnown RBP13.02□□□□□ -0.33
USP47-202ENST00000339865 CYP2A7P20853 494 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 HKDC1Q2TB90 917 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 IL27RAQ6UWB1 636 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 ANKFN1Q8N957 763 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 TCP10LQ8TDR4 215 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 KLHL5Q96PQ7 755 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 TMEM47Q9BQJ4 181 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.02□□□□□ -0.33
USP47-202ENST00000339865 REXO2Q9Y3B8 237 aaKnown RBP13.02□□□□□ -0.33
USP47-202ENST00000339865 DNAJB2P25686 324 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 FAM196AQ6ZSG2 479 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 SNX32Q86XE0 403 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 CARNMT1Q8N4J0 409 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 TTLL6Q8N841 843 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 EIF1ADQ8N9N8 165 aaKnown RBP13.02□□□□□ -0.33
USP47-202ENST00000339865 GRPEL2Q8TAA5 225 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 PTCD2Q8WV60 388 aaKnown RBP13.02□□□□□ -0.33
USP47-202ENST00000339865 HNRNPLLQ8WVV9 542 aaKnown RBP13.02□□□□□ -0.33
USP47-202ENST00000339865 PIK3R3Q92569 461 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 PLIN3O60664 434 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 SIN3BO75182 1162 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 H2AFXP16104 143 aaPredicted RBP13.02□□□□□ -0.33
USP47-202ENST00000339865 CYP2B6P20813 491 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 S100A3P33764 101 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 PRKAA1Q13131 559 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 N4BP2L1Q5TBK1 243 aaPredicted RBP13.02□□□□□ -0.33
USP47-202ENST00000339865 ACAD10Q6JQN1 1059 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 THAP2Q9H0W7 228 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 AK5Q9Y6K8 562 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 TRIP11Q15643 1979 aa13.02□□□□□ -0.33
USP47-202ENST00000339865 MRASO14807 208 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 GRK5P34947 590 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 PTDSS1P48651 473 aaKnown RBP13.01□□□□□ -0.33
USP47-202ENST00000339865 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.01□□□□□ -0.33
USP47-202ENST00000339865 SRBD1Q8N5C6 995 aaKnown RBP13.01□□□□□ -0.33
USP47-202ENST00000339865 SLC20A1Q8WUM9 679 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 ERMAPQ96PL5 475 aaPredicted RBP13.01□□□□□ -0.33
USP47-202ENST00000339865 KCNS3Q9BQ31 491 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 HGH1Q9BTY7 390 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 SNX7Q9UNH6 387 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 AFF2P51816 1311 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 KIAA0232Q92628 1395 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 URB2Q14146 1524 aaKnown RBP13.01□□□□□ -0.33
USP47-202ENST00000339865 F5H5T6 163 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 RARGP13631 454 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 GARTP22102 1010 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 ABL2P42684 1182 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 TBC1D25Q3MII6 688 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 REEP2Q9BRK0 252 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 LGR5O75473 907 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 CELF2O95319 508 aaKnown RBP13.01□□□□□ -0.33
USP47-202ENST00000339865 TUBA4AP68366 448 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 EN1Q05925 392 aaPredicted RBP13.01□□□□□ -0.33
USP47-202ENST00000339865 EML3Q32P44 896 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 STRIP1Q5VSL9 837 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 GCNT7Q6ZNI0 430 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 ZZZ3Q8IYH5 903 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 GALNT6Q8NCL4 622 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 TMEM8AQ9HCN3 771 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 STARD7Q9NQZ5 370 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 GRHL1Q9NZI5 618 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 ATXN10Q9UBB4 475 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 SNAP91O60641 907 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 USP12O75317 370 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 EYA4O95677 639 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 RPL6Q02878 288 aaKnown RBP13.01□□□□□ -0.33
USP47-202ENST00000339865 USPL1Q5W0Q7 1092 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 RAB43Q86YS6 212 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 BORCS5Q969J3 196 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 S100PBPQ96BU1 408 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 CKLFQ9UBR5 152 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 C3orf18Q9UK00 162 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 DRG1Q9Y295 367 aaKnown RBP13.01□□□□□ -0.33
USP47-202ENST00000339865 KPNA3O00505 521 aaPredicted RBP13.01□□□□□ -0.33
USP47-202ENST00000339865 THEGLP0DJG4 465 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 BOP1Q14137 746 aaKnown RBP13.01□□□□□ -0.33
USP47-202ENST00000339865 ZCCHC23Q6ZST2 131 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 SLFN11Q7Z7L1 901 aa13.01□□□□□ -0.33
USP47-202ENST00000339865 PEX5LQ8IYB4 626 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms