RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 IFNEQ86WN2 208 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 DNAJC9Q8WXX5 260 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 RABGEF1Q9UJ41 708 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 GRIN2DO15399 1336 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 UBDO15205 165 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 VPS26AO75436 327 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 FAM163BP0C2L3 166 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 ZNF132P52740 706 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 KLC1Q07866 573 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 PABPC1LQ4VXU2 614 aaKnown RBP6.4□□□□□ -1.38
PRKDC-202ENST00000338368 IFNL1Q8IU54 200 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 SLC9A7Q96T83 725 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 TBL1YQ9BQ87 522 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 TRIP11Q15643 1979 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 H0YGN5 161 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 SLC5A3P53794 718 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 FLOT2Q14254 428 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 INPP5DQ92835 1189 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 RNF112Q9ULX5 631 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 NFS1Q9Y697 457 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 A0A1W2PQH9 124 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 ARL5CA6NH57 179 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 MSI1O43347 362 aaKnown RBP6.4□□□□□ -1.38
PRKDC-202ENST00000338368 DPYSL2Q16555 572 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 DYRK4Q9NR20 520 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 CHRAC1Q9NRG0 131 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 TMEM39AQ9NV64 488 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 RABGGTBP53611 331 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 ELF3P78545 371 aaPredicted RBP6.4□□□□□ -1.38
PRKDC-202ENST00000338368 LBRQ14739 615 aaKnown RBP6.4□□□□□ -1.38
PRKDC-202ENST00000338368 ICA1LQ8NDH6 482 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 PHF21BQ96EK2 531 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 THAP1Q9NVV9 213 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 FBXO5Q9UKT4 447 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 SCN11AQ9UI33 1791 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 KCNE1P15382 129 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 VHLP40337 213 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 EPHB3P54753 998 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 MAXP61244 160 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 TDRD5Q8NAT2 981 aaKnown RBP6.4□□□□□ -1.38
PRKDC-202ENST00000338368 SPDYE1Q8NFV5 336 aaPredicted RBP6.4□□□□□ -1.38
PRKDC-202ENST00000338368 PIP4K2CQ8TBX8 421 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 CNTN6Q9UQ52 1028 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 ADAMTS7Q9UKP4 1686 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 TIAM2Q8IVF5 1701 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 KLRC2P26717 231 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 SCNN1AP37088 669 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 PSEN1P49768 467 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 CTBP1Q13363 440 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 SEMA5AQ13591 1074 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 IKBKEQ14164 716 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 PSMD5Q16401 504 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 LRRC8BQ6P9F7 803 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 CEP70Q8NHQ1 597 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 MECRQ9BV79 373 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 TCF7L2Q9NQB0 619 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 SEPT3Q9UH03 358 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 SF3B1O75533 1304 aaKnown RBP eCLIP6.4□□□□□ -1.391e-6■■■■■ 63.9
PRKDC-202ENST00000338368 SUPT3HB4E1H0 165 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 SUPT3HO75486 399 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 TPBGLP0DKB5 382 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 FGFR1P11362 822 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 SMYD5Q6GMV2 418 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 FITM2Q8N6M3 262 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 ACE2Q9BYF1 805 aaPredicted RBP6.4□□□□□ -1.39
PRKDC-202ENST00000338368 SCUBE2Q9NQ36 999 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 SNX15Q9NRS6 342 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 ASMTLO95671 621 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 HOXB8P17481 243 aaPredicted RBP6.4□□□□□ -1.39
PRKDC-202ENST00000338368 AKT1P31749 480 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 PRKAA2P54646 552 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 POU4F1Q01851 419 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 ARHGAP15Q53QZ3 475 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 TMTC4Q5T4D3 741 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 ZNF618Q5T7W0 954 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 CLEC20AQ6ZU45 233 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 CNTRLQ7Z7A1 2325 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 NTAN1Q96AB6 310 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 CDK5RAP1Q96SZ6 601 aaKnown RBP6.4□□□□□ -1.39
PRKDC-202ENST00000338368 OSBPL7Q9BZF2 842 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 CYTH4Q9UIA0 394 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 FZD10Q9ULW2 581 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 TMEM88BA6NKF7 163 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 AKAP10O43572 662 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 DUSP4Q13115 394 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 OSTM1Q86WC4 334 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 PIWIL1Q96J94 861 aaKnown RBP6.4□□□□□ -1.39
PRKDC-202ENST00000338368 GDAP2Q9NXN4 497 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 TAS2R13Q9NYV9 303 aa6.4□□□□□ -1.39
PRKDC-202ENST00000338368 TRIM16O95361 564 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 SERPINH1P50454 418 aaKnown RBP6.39□□□□□ -1.39
PRKDC-202ENST00000338368 BCL2L1Q07817 233 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 ITIH5Q86UX2 942 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 ZNF567Q8N184 647 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 DBF4BQ8NFT6 615 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 BTBD10Q9BSF8 475 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 CLPBQ9H078 707 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 FBXO6Q9NRD1 293 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-202ENST00000338368 DNMT3LQ9UJW3 386 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 FAM50BQ9Y247 325 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms