RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 FGFR3P22607 806 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 ATP5F1P24539 256 aaPredicted RBP13.96□□□□□ -0.17
RTN4-202ENST00000337526 GSTT1P30711 240 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 GRIA4P48058 902 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 CHN2P52757 468 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 ATP1A4Q13733 1029 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 UBAP2LQ14157 1087 aaKnown RBP13.96□□□□□ -0.17
RTN4-202ENST00000337526 PFKFB4Q16877 469 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 PIWIL4Q7Z3Z4 852 aaKnown RBP13.96□□□□□ -0.17
RTN4-202ENST00000337526 LRP10Q7Z4F1 713 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 RORBQ92753 470 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 MBOAT7Q96N66 472 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 HGH1Q9BTY7 390 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 CAB39Q9Y376 341 aaPredicted RBP13.96□□□□□ -0.17
RTN4-202ENST00000337526 A0A087X1B8 175 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 SHOX2O60902 331 aaPredicted RBP13.96□□□□□ -0.17
RTN4-202ENST00000337526 GOT1P17174 413 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 NPR3P17342 541 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 LBPP18428 481 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 NFKB1P19838 968 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 ADCYAP1R1P41586 468 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 WSCD1Q658N2 575 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 JOSD2Q8TAC2 188 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 ITFG1Q8TB96 612 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 ADAM28Q9UKQ2 775 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 FZD1Q9UP38 647 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 BIRC5O15392 142 aa13.96□□□□□ -0.18
RTN4-202ENST00000337526 HS6ST1O60243 411 aa13.96□□□□□ -0.18
RTN4-202ENST00000337526 VPS4BO75351 444 aa13.96□□□□□ -0.18
RTN4-202ENST00000337526 YWHAQP27348 245 aa13.96□□□□□ -0.18
RTN4-202ENST00000337526 ELAVL2Q12926 359 aaKnown RBP13.96□□□□□ -0.18
RTN4-202ENST00000337526 FAM45BPQ6NSW5 357 aa13.96□□□□□ -0.18
RTN4-202ENST00000337526 TMEM26Q6ZUK4 368 aa13.96□□□□□ -0.18
RTN4-202ENST00000337526 ALYREFQ86V81 257 aaKnown RBP13.96□□□□□ -0.18
RTN4-202ENST00000337526 ANKRD52Q8NB46 1076 aa13.96□□□□□ -0.18
RTN4-202ENST00000337526 COPS5Q92905 334 aa13.96□□□□□ -0.18
RTN4-202ENST00000337526 MARK4Q96L34 752 aa13.96□□□□□ -0.18
RTN4-202ENST00000337526 COG5Q9UP83 839 aa13.96□□□□□ -0.18
RTN4-202ENST00000337526 GRIN3BO60391 1043 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 LTA4HP09960 611 aaKnown RBP13.95□□□□□ -0.18
RTN4-202ENST00000337526 FMO4P31512 558 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 GRIA3P42263 894 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 NEK3P51956 506 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 ACBD5Q5T8D3 534 aaPredicted RBP13.95□□□□□ -0.18
RTN4-202ENST00000337526 EEF1DP3Q658K8 133 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 GLT6D1Q7Z4J2 308 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 ARHGAP22Q7Z5H3 698 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 ULK2Q8IYT8 1036 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 OMDQ99983 421 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 CLIC5Q9NZA1 410 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 GSTM1P09488 218 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 ERCC2P18074 760 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 MSH3P20585 1137 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 EPHA3P29320 983 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 FCGRTP55899 365 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 ALDH6A1Q02252 535 aaKnown RBP13.95□□□□□ -0.18
RTN4-202ENST00000337526 CELF3Q5SZQ8 465 aaKnown RBP13.95□□□□□ -0.18
RTN4-202ENST00000337526 CLNKQ7Z7G1 428 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 EFCAB3Q8N7B9 438 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 C12orf29Q8N999 325 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 SEMA4BQ9NPR2 832 aaPredicted RBP13.95□□□□□ -0.18
RTN4-202ENST00000337526 ZMYM5Q9UJ78 669 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 TKTP29401 623 aaKnown RBP13.95□□□□□ -0.18
RTN4-202ENST00000337526 ANXA11P50995 505 aaKnown RBP13.95□□□□□ -0.18
RTN4-202ENST00000337526 PSME3P61289 254 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 PDK3Q15120 406 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 TMEM86AQ8N2M4 240 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 FAM13CQ8NE31 585 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 STAG3L4Q8TBR4 150 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 POLR1EQ9GZS1 481 aaKnown RBP13.95□□□□□ -0.18
RTN4-202ENST00000337526 ITM2BQ9Y287 266 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 SNRPB2P08579 225 aaKnown RBP13.95□□□□□ -0.18
RTN4-202ENST00000337526 RAB27AP51159 221 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 TATDN1Q6P1N9 297 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 CATSPERGQ6ZRH7 1159 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 ZNF467Q7Z7K2 595 aaPredicted RBP13.95□□□□□ -0.18
RTN4-202ENST00000337526 SMPD4Q9NXE4 827 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 RAP2CQ9Y3L5 183 aa13.95□□□□□ -0.18
RTN4-202ENST00000337526 PRR5-ARHGAP8B1AHC4 643 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 PDHXO00330 501 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 HOXA2O43364 376 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 ARHGAP8P85298 464 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 DCTN2Q13561 401 aaKnown RBP13.94□□□□□ -0.18
RTN4-202ENST00000337526 MFSD10Q14728 455 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 NCF4Q15080 339 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 B3GNT6Q6ZMB0 384 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 SLC41A1Q8IVJ1 513 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 PCSK9Q8NBP7 692 aaKnown RBP13.94□□□□□ -0.18
RTN4-202ENST00000337526 TBCDQ9BTW9 1192 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 CACNA2D2Q9NY47 1150 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 MORF4L1Q9UBU8 362 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 ANAPC2Q9UJX6 822 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 DYRK1BQ9Y463 629 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 PCNAP12004 261 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 CYP2C18P33260 490 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 GABRB2P47870 512 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 MAPK10P53779 464 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 IL2P60568 153 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 PTPN20Q4JDL3 420 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 GPSM1Q86YR5 675 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms