RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 VPS45Q9NRW7 570 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 PPARGC1AQ9UBK2 798 aaKnown RBP9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 AGO1Q9UL18 857 aaKnown RBP9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 OR56A5P0C7T3 313 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 PBX3P40426 434 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 ITGA9Q13797 1035 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 NAA30Q147X3 362 aaPredicted RBP9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 PCID2Q5JVF3 399 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 NPNTQ6UXI9 565 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 TMEM139Q8IV31 216 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 TTC30BQ8N4P2 665 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 CXorf40AQ8TE69 158 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 NTAN1Q96AB6 310 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 SDCCAG3Q96C92 435 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 STRA6Q9BX79 667 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 NMRK1Q9NWW6 199 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 LNPEPQ9UIQ6 1025 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 FGF1P05230 155 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 RBP1P09455 135 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 BEND6Q5SZJ8 279 aaPredicted RBP9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 FAM47EQ6ZV65 393 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 FUKQ8N0W3 1084 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 LRRC37BQ96QE4 947 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 FIZ1Q96SL8 496 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 ELAC2Q9BQ52 826 aaKnown RBP9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 WWP1Q9H0M0 922 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 NDE1Q9NXR1 346 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 UTP6Q9NYH9 597 aaKnown RBP9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 MPP6Q9NZW5 540 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 STK38LQ9Y2H1 464 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 SSC5DA1L4H1 1573 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 QSOX1O00391 747 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 TSHRP16473 764 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 FSHRP23945 695 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 TNFRSF8P28908 595 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 CRABP2P29373 138 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 SNX31Q8N9S9 440 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 PHOSPHO2Q8TCD6 241 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 ZMAT2Q96NC0 199 aaKnown RBP9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 SEMA3CQ99985 751 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 CATSPERZQ9NTU4 200 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 CPQQ9Y646 472 aa9.48□□□□□ -0.89
FNDC3B-201ENST00000336824 YJEFN3A6XGL0 299 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 E7ENQ6 273 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 PRPF4O43172 522 aaKnown RBP eCLIP9.47□□□□□ -0.894e-7■□□□□ 10.9
FNDC3B-201ENST00000336824 KITP10721 976 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 FECHP22830 423 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 GP5P40197 560 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 ELK3P41970 407 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 TAC4Q86UU9 113 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 GIMAP7Q8NHV1 300 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 TRIM15Q9C019 465 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 MLXIPLQ9NP71 852 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 MAN1C1Q9NR34 630 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 FZD10Q9ULW2 581 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 REXO2Q9Y3B8 237 aaKnown RBP9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 PPEF2O14830 753 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 HLA-DPA1P20036 260 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 ATP13A4Q4VNC1 1196 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 CFAP52Q8N1V2 620 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 RASGEF1CQ8N431 466 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 NDRG1Q92597 394 aaKnown RBP9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 ZIC5Q96T25 663 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 PNKPQ96T60 521 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 EFHD1Q9BUP0 239 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 ETNK1Q9HBU6 452 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 SAE1Q9UBE0 346 aaPredicted RBP9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 ADAM21Q9UKJ8 722 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 ARIH1Q9Y4X5 557 aaPredicted RBP9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 WDR90Q96KV7 1748 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 MARCKSL1P49006 195 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 GAD2Q05329 585 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 HIST2H2ACQ16777 129 aaPredicted RBP9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 TMTC4Q5T4D3 741 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 HIST2H2AA3Q6FI13 130 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 CFAP61Q8NHU2 1237 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 SLC35F5Q8WV83 523 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 B3GALT6Q96L58 329 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 KCTD15Q96SI1 283 aaPredicted RBP9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 PAFAH2Q99487 392 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 TAS2R13Q9NYV9 303 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 WWOXQ9NZC7 414 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 GSTA4O15217 222 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 SPTLC1O15269 473 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 NDUFS2O75306 463 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 CDKN2BP42772 138 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 MARCH8Q5T0T0 291 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 PTAR1Q7Z6K3 402 aaPredicted RBP9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 C4orf33Q8N1A6 199 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 ARL14EPQ8N8R7 260 aaPredicted RBP9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 ZCWPW1Q9H0M4 648 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 XYLT2Q9H1B5 865 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 GDF3Q9NR23 364 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 FNIP2Q9P278 1114 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 COL4A5P29400 1685 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 BCLAF3A2AJT9 711 aaKnown RBP9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 WDR27A2RRH5 827 aa9.47□□□□□ -0.89
FNDC3B-201ENST00000336824 NUMBP49757 651 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms