RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 CILPO75339 1184 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 CHEK2O96017 543 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 HOXC6P09630 235 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 RALBP11234 206 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 TFE3P19532 575 aaPredicted RBP6.6□□□□□ -1.35
HMG20A-201ENST00000336216 ALDH1A3P47895 512 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 NAGLUP54802 743 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 ADARP55265 1226 aaKnown RBP6.6□□□□□ -1.35
HMG20A-201ENST00000336216 SH3BGRP55822 239 aaPredicted RBP6.6□□□□□ -1.35
HMG20A-201ENST00000336216 GPX6P59796 221 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 SREBF2Q12772 1141 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 DLG1Q12959 904 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 FBXO48Q5FWF7 155 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 C9orf57Q5W0N0 161 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 ZNF410Q86VK4 478 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 CFAP52Q8N1V2 620 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 PPTC7Q8NI37 304 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 CPT1BQ92523 772 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 WNT8BQ93098 351 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 PIWIL1Q96J94 861 aaKnown RBP6.6□□□□□ -1.35
HMG20A-201ENST00000336216 SERPINI1Q99574 410 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 SIKE1Q9BRV8 207 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 SPATA16Q9BXB7 569 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 LRRC40Q9H9A6 602 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 PCDH18Q9HCL0 1135 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 MID2Q9UJV3 735 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 BAG5Q9UL15 447 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 TDRKHQ9Y2W6 561 aaKnown RBP6.6□□□□□ -1.35
HMG20A-201ENST00000336216 SCN9AQ15858 1988 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 F5P12259 2224 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 LTBP3Q9NS15 1303 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 A0A096LPK6 155 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 C9IYK1 514 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 RNASEH1O60930 286 aaKnown RBP6.6□□□□□ -1.35
HMG20A-201ENST00000336216 SH3BGRLO75368 114 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 F9P00740 461 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 ABHD2P08910 425 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 CPA3P15088 417 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 CDKN2BP42772 138 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 GJA9P57773 515 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 FOLH1Q04609 750 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 PPIDQ08752 370 aaKnown RBP6.6□□□□□ -1.35
HMG20A-201ENST00000336216 C16orf72Q14CZ0 275 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 FAM83EQ2M2I3 478 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 MARC1Q5VT66 337 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 DPY19L2P1Q6NXN4 242 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 UNC5BQ8IZJ1 945 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 CARNMT1Q8N4J0 409 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 DDI1Q8WTU0 396 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 NCLNQ969V3 563 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 PANX3Q96QZ0 392 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 PCYT2Q99447 389 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 ST6GALNAC4Q9H4F1 302 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 PNPOQ9NVS9 261 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 SLC17A6Q9P2U8 582 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 FAM50BQ9Y247 325 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 COQ4Q9Y3A0 265 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 SLC30A1Q9Y6M5 507 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 BRWD1Q9NSI6 2320 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 ATP6AP2A0A1C7CYW4 349 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 SUPT3HB4E1H0 165 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 FKBP6O75344 327 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 ATP6V1G1O75348 118 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 ATP6AP2O75787 350 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 SORBS2O94875 1100 aaKnown RBP6.59□□□□□ -1.35
HMG20A-201ENST00000336216 TMEM63AO94886 807 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 C22orf31O95567 290 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 VCLP18206 1134 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 NFKB1P19838 968 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 AKT1P31749 480 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 SERPINB9P50453 376 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 LILRA4P59901 499 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 ESRRGP62508 458 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 PHEXP78562 749 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 OLIG2Q13516 323 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 CDH18Q13634 790 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 DDX39BQ13838 428 aaKnown RBP6.59□□□□□ -1.35
HMG20A-201ENST00000336216 RBBP7Q16576 425 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 RAB6CQ53S08 254 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 C1orf220Q5T0J3 134 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 CERCAMQ5T4B2 595 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 RNASEH2BQ5TBB1 312 aaKnown RBP6.59□□□□□ -1.35
HMG20A-201ENST00000336216 RAP1GAP2Q684P5 730 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 PDPK2PQ6A1A2 396 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 TMC7Q7Z402 723 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 ANKS1BQ7Z6G8 1248 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 APLFQ8IW19 511 aaPredicted RBP6.59□□□□□ -1.35
HMG20A-201ENST00000336216 CCDC185Q8N715 623 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 PLD5Q8N7P1 536 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 ZNF513Q8N8E2 541 aaPredicted RBP6.59□□□□□ -1.35
HMG20A-201ENST00000336216 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.59□□□□□ -1.35
HMG20A-201ENST00000336216 DIS3LQ8TF46 1054 aaKnown RBP6.59□□□□□ -1.35
HMG20A-201ENST00000336216 CMTM5Q96DZ9 223 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 P2RY11Q96G91 374 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 RAB6CQ9H0N0 254 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 GPAMQ9HCL2 828 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 BCAP29Q9UHQ4 241 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 PADI3Q9ULW8 664 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 LTBP1Q14766 1721 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 C15orf38-AP3S2A0A0A6YYH1 394 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms