RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ACVRL1P37023 503 aa12.84□□□□□ -0.35
LIMK1-201ENST00000336180 GALNT2Q10471 571 aa12.84□□□□□ -0.35
LIMK1-201ENST00000336180 SCN5AQ14524 2016 aa12.84□□□□□ -0.35
LIMK1-201ENST00000336180 SH2D5Q6ZV89 423 aa12.84□□□□□ -0.35
LIMK1-201ENST00000336180 DENND6AQ8IWF6 608 aa12.84□□□□□ -0.35
LIMK1-201ENST00000336180 PLD6Q8N2A8 252 aaKnown RBP12.84□□□□□ -0.35
LIMK1-201ENST00000336180 HMCESQ96FZ2 354 aa12.84□□□□□ -0.35
LIMK1-201ENST00000336180 FERMT1Q9BQL6 677 aa12.84□□□□□ -0.35
LIMK1-201ENST00000336180 TSSK1BQ9BXA7 367 aa12.84□□□□□ -0.35
LIMK1-201ENST00000336180 MTF2Q9Y483 593 aaPredicted RBP12.84□□□□□ -0.35
LIMK1-201ENST00000336180 PHGDHO43175 533 aaKnown RBP12.83□□□□□ -0.36
LIMK1-201ENST00000336180 FKTNO75072 461 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 CABYRO75952 493 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 ZWINTO95229 277 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 N4BP2L1Q5TBK1 243 aaPredicted RBP12.83□□□□□ -0.36
LIMK1-201ENST00000336180 KLHL23Q8NBE8 558 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 RPRD1AQ96P16 312 aaPredicted RBP12.83□□□□□ -0.36
LIMK1-201ENST00000336180 HIPK3Q9H422 1215 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 CD248Q9HCU0 757 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 RCOR3Q9P2K3 495 aaPredicted RBP12.83□□□□□ -0.36
LIMK1-201ENST00000336180 KANSL3Q9P2N6 904 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 MTO1Q9Y2Z2 717 aaKnown RBP12.83□□□□□ -0.36
LIMK1-201ENST00000336180 SZT2Q5T011 3432 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 MTMR11A4FU01 709 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 GOLGA8CPA6NN73 597 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 GJB5O95377 273 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 NEK3P51956 506 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 SLC10A7Q0GE19 358 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 SCAPQ12770 1279 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 TRIM60Q495X7 471 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 PDZD4Q76G19 769 aaPredicted RBP12.83□□□□□ -0.36
LIMK1-201ENST00000336180 DCP1BQ8IZD4 617 aaKnown RBP12.83□□□□□ -0.36
LIMK1-201ENST00000336180 PPP1R14CQ8TAE6 165 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 PSMG2Q969U7 264 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 CERS2Q96G23 380 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 SUDS3Q9H7L9 328 aaPredicted RBP12.83□□□□□ -0.36
LIMK1-201ENST00000336180 TMEM161AQ9NX61 479 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 BFARQ9NZS9 450 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 EYSQ5T1H1 3165 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 NDC80O14777 642 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 AURKAO14965 403 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 ITM2AO43736 263 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 KRT38O76015 456 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 AP2A1O95782 977 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 EOMESO95936 686 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 GALTP07902 379 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 YWHAQP27348 245 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 TYK2P29597 1187 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 ETV4P43268 484 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 CCR10P46092 362 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 NCALDP61601 193 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 MPP1Q00013 466 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 DSC2Q02487 901 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 TLE2Q04725 743 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 BST1Q10588 318 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 PDE1CQ14123 709 aaPredicted RBP12.83□□□□□ -0.36
LIMK1-201ENST00000336180 PTPRRQ15256 657 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 MAPRE1Q15691 268 aaKnown RBP12.83□□□□□ -0.36
LIMK1-201ENST00000336180 ESRP1Q6NXG1 681 aaKnown RBP12.83□□□□□ -0.36
LIMK1-201ENST00000336180 ALYREFQ86V81 257 aaKnown RBP12.83□□□□□ -0.36
LIMK1-201ENST00000336180 ARID3BQ8IVW6 561 aaPredicted RBP12.83□□□□□ -0.36
LIMK1-201ENST00000336180 TBC1D31Q96DN5 1066 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 TEKT5Q96M29 485 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 SLC9A7Q96T83 725 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 OXCT2Q9BYC2 517 aaPredicted RBP12.83□□□□□ -0.36
LIMK1-201ENST00000336180 GBA3Q9H227 469 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 PRDM5Q9NQX1 630 aaPredicted RBP12.83□□□□□ -0.36
LIMK1-201ENST00000336180 MOCS1Q9NZB8 636 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 MARCH2Q9P0N8 246 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 SENP1Q9P0U3 644 aa12.83□□□□□ -0.36
LIMK1-201ENST00000336180 ANKRD33BA6NCL7 494 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 MAFKO60675 156 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 VAPBO95292 243 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 ITGA2BP08514 1039 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 ACRP10323 421 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 SKIP12755 728 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 PGAM1P18669 254 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 MAGEA6P43360 314 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 IHHQ14623 411 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 ITIH4Q14624 930 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 TAF1BQ53T94 588 aaPredicted RBP12.82□□□□□ -0.36
LIMK1-201ENST00000336180 NUDCD3Q8IVD9 361 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 UROC1Q96N76 676 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 NOL6Q9H6R4 1146 aaKnown RBP12.82□□□□□ -0.36
LIMK1-201ENST00000336180 RMI1Q9H9A7 625 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 BAIAP2L1Q9UHR4 511 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 IPO11Q9UI26 975 aaKnown RBP12.82□□□□□ -0.36
LIMK1-201ENST00000336180 SLC39A10Q9ULF5 831 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 SRRM3A6NNA2 597 aaPredicted RBP12.82□□□□□ -0.36
LIMK1-201ENST00000336180 OAZ2O95190 189 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 POLBP06746 335 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 BMP1P13497 986 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 TYMPP19971 482 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 HNRNPH1P31943 449 aaKnown RBP12.82□□□□□ -0.36
LIMK1-201ENST00000336180 SERPINB6P35237 376 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 ANKRD20A4Q4UJ75 823 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 MS4A13Q5J8X5 152 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 AP1ARQ63HQ0 302 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 KIAA1841Q6NSI8 718 aa12.82□□□□□ -0.36
LIMK1-201ENST00000336180 FBXL22Q6P050 247 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms