RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 ABCB8Q9NUT2 735 aa21.99■■□□□ 1.11
TPM1-204ENST00000334895 KIAA1522Q9P206 1035 aaPredicted RBP21.99■■□□□ 1.11
TPM1-204ENST00000334895 KIAA1549LQ6ZVL6 1849 aa21.99■■□□□ 1.11
TPM1-204ENST00000334895 KCNN4O15554 427 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 ASGR2P07307 311 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 CISD3P0C7P0 127 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 ETS1P14921 441 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 CCNCP24863 283 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 ZNF33AQ06730 810 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 LRRC49Q8IUZ0 686 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 CCDC13Q8IYE1 715 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 SLC44A3Q8N4M1 653 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 HTR3CQ8WXA8 447 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 ZNF419Q96HQ0 510 aaPredicted RBP21.98■■□□□ 1.11
TPM1-204ENST00000334895 SPON2Q9BUD6 331 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 SLC2A11Q9BYW1 496 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 BRD9Q9H8M2 597 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 PDFQ9HBH1 243 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 ATP13A1Q9HD20 1204 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 PRKAG3Q9UGI9 489 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 MIA3Q5JRA6 1907 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 LOC730098B7Z3J9 87 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 SGK1O00141 431 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 KCNK1O00180 336 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 ZMPSTE24O75844 475 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 ECEL1O95672 775 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 GJA4P35212 333 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 SLC6A11P48066 632 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 CLCN6P51797 869 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 MESP2Q0VG99 397 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 WASHC5Q12768 1159 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 DHX34Q14147 1143 aaKnown RBP21.98■■□□□ 1.11
TPM1-204ENST00000334895 NAIF1Q69YI7 327 aaPredicted RBP21.98■■□□□ 1.11
TPM1-204ENST00000334895 IL31Q6EBC2 164 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 JAMLQ86YT9 394 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 CCDC117Q8IWD4 279 aaPredicted RBP21.98■■□□□ 1.11
TPM1-204ENST00000334895 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.98■■□□□ 1.11
TPM1-204ENST00000334895 RTP4Q96DX8 246 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 RUNDC3BQ96NL0 473 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 IGSF9Q9P2J2 1179 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 VPS28Q9UK41 221 aa21.98■■□□□ 1.11
TPM1-204ENST00000334895 CFAP69A5D8W1 941 aa21.97■■□□□ 1.11
TPM1-204ENST00000334895 EFCAB8A8MWE9 144 aa21.97■■□□□ 1.11
TPM1-204ENST00000334895 KDELR3O43731 214 aa21.97■■□□□ 1.11
TPM1-204ENST00000334895 SNAP91O60641 907 aa21.97■■□□□ 1.11
TPM1-204ENST00000334895 PRAMEF11O60813 436 aa21.97■■□□□ 1.11
TPM1-204ENST00000334895 TULP3O75386 442 aa21.97■■□□□ 1.11
TPM1-204ENST00000334895 PLK1P53350 603 aa21.97■■□□□ 1.11
TPM1-204ENST00000334895 ZBTB17Q13105 803 aa21.97■■□□□ 1.11
TPM1-204ENST00000334895 PLEKHG6Q3KR16 790 aa21.97■■□□□ 1.11
TPM1-204ENST00000334895 FUT11Q495W5 492 aa21.97■■□□□ 1.11
TPM1-204ENST00000334895 TEX35Q5T0J7 233 aa21.97■■□□□ 1.11
TPM1-204ENST00000334895 HEATR6Q6AI08 1181 aaKnown RBP21.97■■□□□ 1.11
TPM1-204ENST00000334895 C8orf74Q6P047 294 aa21.97■■□□□ 1.11
TPM1-204ENST00000334895 KIAA0907Q7Z7F0 614 aaPredicted RBP21.97■■□□□ 1.11
TPM1-204ENST00000334895 ZNF354CQ86Y25 554 aa21.97■■□□□ 1.11
TPM1-204ENST00000334895 NXPE3Q969Y0 559 aa21.97■■□□□ 1.11
TPM1-204ENST00000334895 TRIM51Q9BSJ1 452 aa21.97■■□□□ 1.11
TPM1-204ENST00000334895 DNAJC17Q9NVM6 304 aaKnown RBP21.97■■□□□ 1.11
TPM1-204ENST00000334895 GGA2Q9UJY4 613 aa21.97■■□□□ 1.11
TPM1-204ENST00000334895 ACTL7AQ9Y615 435 aa21.97■■□□□ 1.11
TPM1-204ENST00000334895 MATN3O15232 486 aa21.96■■□□□ 1.11
TPM1-204ENST00000334895 ZSCAN5DPP0CG00 497 aa21.96■■□□□ 1.11
TPM1-204ENST00000334895 PABPC1P11940 636 aaKnown RBP21.96■■□□□ 1.11
TPM1-204ENST00000334895 STIP1P31948 543 aaKnown RBP21.96■■□□□ 1.11
TPM1-204ENST00000334895 ETFBP38117 255 aa21.96■■□□□ 1.11
TPM1-204ENST00000334895 OPRD1P41143 372 aa21.96■■□□□ 1.11
TPM1-204ENST00000334895 OXCT1P55809 520 aa21.96■■□□□ 1.11
TPM1-204ENST00000334895 ARF5P84085 180 aa21.96■■□□□ 1.11
TPM1-204ENST00000334895 IL10RBQ08334 325 aa21.96■■□□□ 1.11
TPM1-204ENST00000334895 TRIP13Q15645 432 aaPredicted RBP21.96■■□□□ 1.11
TPM1-204ENST00000334895 ITPRIPL2Q3MIP1 535 aa21.96■■□□□ 1.11
TPM1-204ENST00000334895 PITRM1Q5JRX3 1037 aa21.96■■□□□ 1.11
TPM1-204ENST00000334895 LEKR1Q6ZMV7 388 aa21.96■■□□□ 1.11
TPM1-204ENST00000334895 DCAF4L2Q8NA75 395 aa21.96■■□□□ 1.11
TPM1-204ENST00000334895 CCDC26Q8TAB7 109 aa21.96■■□□□ 1.11
TPM1-204ENST00000334895 GRK7Q8WTQ7 553 aa21.96■■□□□ 1.11
TPM1-204ENST00000334895 MAML1Q92585 1016 aa21.96■■□□□ 1.11
TPM1-204ENST00000334895 FATE1Q969F0 183 aa21.96■■□□□ 1.11
TPM1-204ENST00000334895 XPO6Q96QU8 1125 aaKnown RBP21.96■■□□□ 1.11
TPM1-204ENST00000334895 CEP41Q9BYV8 373 aa21.96■■□□□ 1.11
TPM1-204ENST00000334895 SP110Q9HB58 689 aa21.96■■□□□ 1.11
TPM1-204ENST00000334895 SEPT10Q9P0V9 454 aa21.96■■□□□ 1.11
TPM1-204ENST00000334895 FEZ2Q9UHY8 353 aaPredicted RBP21.96■■□□□ 1.11
TPM1-204ENST00000334895 RNF103O00237 685 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 CBX4O00257 560 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 IFNB1P01574 187 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 PTPN3P26045 913 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 SLC7A5Q01650 507 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 LMNB2Q03252 620 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 NR1H3Q13133 447 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 SLC12A1Q13621 1099 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 TMEM215Q68D42 235 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 GSTA5Q7RTV2 222 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 ADIPOR2Q86V24 386 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 PHTF2Q8N3S3 785 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 ZNF557Q8N988 423 aaPredicted RBP21.95■■□□□ 1.1
TPM1-204ENST00000334895 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.95■■□□□ 1.1
TPM1-204ENST00000334895 DMGDHQ9UI17 866 aaKnown RBP21.95■■□□□ 1.1
TPM1-204ENST00000334895 VPS51Q9UID3 782 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms