RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 RELAQ04206 551 aa16.56■□□□□ 0.24
UPK3B-202ENST00000334348 NSUN2Q08J23 767 aaKnown RBP eCLIP16.56■□□□□ 0.24
UPK3B-202ENST00000334348 KCTD21Q4G0X4 260 aa16.56■□□□□ 0.24
UPK3B-202ENST00000334348 SPANXN3Q5MJ09 141 aa16.56■□□□□ 0.24
UPK3B-202ENST00000334348 TMEM198Q66K66 360 aa16.56■□□□□ 0.24
UPK3B-202ENST00000334348 COLGALT1Q8NBJ5 622 aa16.56■□□□□ 0.24
UPK3B-202ENST00000334348 HTR3CQ8WXA8 447 aa16.56■□□□□ 0.24
UPK3B-202ENST00000334348 CNKSR2Q8WXI2 1034 aa16.56■□□□□ 0.24
UPK3B-202ENST00000334348 C12orf43Q96C57 262 aaKnown RBP16.56■□□□□ 0.24
UPK3B-202ENST00000334348 DUS3LQ96G46 650 aaKnown RBP16.56■□□□□ 0.24
UPK3B-202ENST00000334348 HEXIM2Q96MH2 286 aaKnown RBP16.56■□□□□ 0.24
UPK3B-202ENST00000334348 UHRF1Q96T88 793 aaPredicted RBP16.56■□□□□ 0.24
UPK3B-202ENST00000334348 NPAS2Q99743 824 aa16.56■□□□□ 0.24
UPK3B-202ENST00000334348 SLC29A1Q99808 456 aa16.56■□□□□ 0.24
UPK3B-202ENST00000334348 TRPV6Q9H1D0 765 aa16.56■□□□□ 0.24
UPK3B-202ENST00000334348 GBA2Q9HCG7 927 aaPredicted RBP16.56■□□□□ 0.24
UPK3B-202ENST00000334348 RNF146Q9NTX7 359 aa16.56■□□□□ 0.24
UPK3B-202ENST00000334348 PIH1D1Q9NWS0 290 aaKnown RBP16.56■□□□□ 0.24
UPK3B-202ENST00000334348 SYBUQ9NX95 663 aa16.56■□□□□ 0.24
UPK3B-202ENST00000334348 SIX4Q9UIU6 781 aa16.56■□□□□ 0.24
UPK3B-202ENST00000334348 HTRA2O43464 458 aaPredicted RBP16.55■□□□□ 0.24
UPK3B-202ENST00000334348 CSPG5O95196 566 aa16.55■□□□□ 0.24
UPK3B-202ENST00000334348 SDC4P31431 198 aa16.55■□□□□ 0.24
UPK3B-202ENST00000334348 CDH15P55291 814 aa16.55■□□□□ 0.24
UPK3B-202ENST00000334348 PRKAA1Q13131 559 aa16.55■□□□□ 0.24
UPK3B-202ENST00000334348 SMAD1Q15797 465 aaKnown RBP16.55■□□□□ 0.24
UPK3B-202ENST00000334348 ANKDD1AQ495B1 522 aa16.55■□□□□ 0.24
UPK3B-202ENST00000334348 FSTL4Q6MZW2 842 aa16.55■□□□□ 0.24
UPK3B-202ENST00000334348 ZNF526Q8TF50 670 aaPredicted RBP16.55■□□□□ 0.24
UPK3B-202ENST00000334348 BORCS5Q969J3 196 aa16.55■□□□□ 0.24
UPK3B-202ENST00000334348 TMEM39BQ9GZU3 492 aa16.55■□□□□ 0.24
UPK3B-202ENST00000334348 C20orf96Q9NUD7 363 aaPredicted RBP16.55■□□□□ 0.24
UPK3B-202ENST00000334348 ADA2Q9NZK5 511 aa16.55■□□□□ 0.24
UPK3B-202ENST00000334348 PTBP2Q9UKA9 531 aaKnown RBP16.55■□□□□ 0.24
UPK3B-202ENST00000334348 F5H423 210 aaPredicted RBP16.55■□□□□ 0.24
UPK3B-202ENST00000334348 SERPINB7O75635 380 aa16.55■□□□□ 0.24
UPK3B-202ENST00000334348 ZNF12P17014 697 aa16.55■□□□□ 0.24
UPK3B-202ENST00000334348 IRF9Q00978 393 aa16.55■□□□□ 0.24
UPK3B-202ENST00000334348 GSTM4Q03013 218 aa16.55■□□□□ 0.24
UPK3B-202ENST00000334348 TGFBIQ15582 683 aa16.55■□□□□ 0.24
UPK3B-202ENST00000334348 DPYSL2Q16555 572 aa16.55■□□□□ 0.24
UPK3B-202ENST00000334348 ZNF829Q3KNS6 432 aaPredicted RBP16.55■□□□□ 0.24
UPK3B-202ENST00000334348 AGAP3Q96P47 875 aa16.55■□□□□ 0.24
UPK3B-202ENST00000334348 SCAF8Q9UPN6 1271 aaKnown RBP16.55■□□□□ 0.24
UPK3B-202ENST00000334348 RIPK3Q9Y572 518 aa16.55■□□□□ 0.24
UPK3B-202ENST00000334348 COPG1Q9Y678 874 aaKnown RBP16.55■□□□□ 0.24
UPK3B-202ENST00000334348 SCN4AP35499 1836 aa16.54■□□□□ 0.24
UPK3B-202ENST00000334348 DICER1Q9UPY3 1922 aaKnown RBP16.54■□□□□ 0.24
UPK3B-202ENST00000334348 HACD1B0YJ81 288 aa16.54■□□□□ 0.24
UPK3B-202ENST00000334348 PSMD12O00232 456 aaPredicted RBP16.54■□□□□ 0.24
UPK3B-202ENST00000334348 PLOD2O00469 737 aa16.54■□□□□ 0.24
UPK3B-202ENST00000334348 PIGNO95427 931 aa16.54■□□□□ 0.24
UPK3B-202ENST00000334348 APOA4P06727 396 aa16.54■□□□□ 0.24
UPK3B-202ENST00000334348 HSPA1AP0DMV8 641 aaKnown RBP16.54■□□□□ 0.24
UPK3B-202ENST00000334348 HSPA1BP0DMV9 641 aaKnown RBP16.54■□□□□ 0.24
UPK3B-202ENST00000334348 MCF2P10911 925 aa16.54■□□□□ 0.24
UPK3B-202ENST00000334348 SLC5A3P53794 718 aa16.54■□□□□ 0.24
UPK3B-202ENST00000334348 PRKAA2P54646 552 aa16.54■□□□□ 0.24
UPK3B-202ENST00000334348 PSME3P61289 254 aa16.54■□□□□ 0.24
UPK3B-202ENST00000334348 CTBSQ01459 385 aa16.54■□□□□ 0.24
UPK3B-202ENST00000334348 TRAP1Q12931 704 aaKnown RBP16.54■□□□□ 0.24
UPK3B-202ENST00000334348 ARL13AQ5H913 290 aaPredicted RBP16.54■□□□□ 0.24
UPK3B-202ENST00000334348 MTX3Q5HYI7 312 aa16.54■□□□□ 0.24
UPK3B-202ENST00000334348 NHSL2Q5HYW2 709 aa16.54■□□□□ 0.24
UPK3B-202ENST00000334348 NXNQ6DKJ4 435 aa16.54■□□□□ 0.24
UPK3B-202ENST00000334348 STRA8Q7Z7C7 330 aa16.54■□□□□ 0.24
UPK3B-202ENST00000334348 TTC30AQ86WT1 665 aa16.54■□□□□ 0.24
UPK3B-202ENST00000334348 DQX1Q8TE96 717 aaKnown RBP16.54■□□□□ 0.24
UPK3B-202ENST00000334348 IL22Q9GZX6 179 aa16.54■□□□□ 0.24
UPK3B-202ENST00000334348 DTLQ9NZJ0 730 aa16.54■□□□□ 0.24
UPK3B-202ENST00000334348 CLEC11AQ9Y240 323 aa16.54■□□□□ 0.24
UPK3B-202ENST00000334348 PCDHGA7Q9Y5G6 932 aa16.54■□□□□ 0.24
UPK3B-202ENST00000334348 SNX13Q9Y5W8 968 aa16.54■□□□□ 0.24
UPK3B-202ENST00000334348 PSME4Q14997 1843 aa16.54■□□□□ 0.24
UPK3B-202ENST00000334348 C2P06681 752 aa16.53■□□□□ 0.24
UPK3B-202ENST00000334348 FGFR3P22607 806 aa16.53■□□□□ 0.24
UPK3B-202ENST00000334348 SLC7A1P30825 629 aa16.53■□□□□ 0.24
UPK3B-202ENST00000334348 GRIA4P48058 902 aa16.53■□□□□ 0.24
UPK3B-202ENST00000334348 DGKZQ13574 1117 aa16.53■□□□□ 0.24
UPK3B-202ENST00000334348 TARBP2Q15633 366 aaKnown RBP16.53■□□□□ 0.24
UPK3B-202ENST00000334348 LIPMQ5VYY2 423 aa16.53■□□□□ 0.24
UPK3B-202ENST00000334348 BSPRYQ5W0U4 402 aa16.53■□□□□ 0.24
UPK3B-202ENST00000334348 GRAMD4Q6IC98 578 aa16.53■□□□□ 0.24
UPK3B-202ENST00000334348 CES3Q6UWW8 571 aa16.53■□□□□ 0.24
UPK3B-202ENST00000334348 OLFML1Q6UWY5 402 aa16.53■□□□□ 0.24
UPK3B-202ENST00000334348 ZYG11AQ6WRX3 759 aa16.53■□□□□ 0.24
UPK3B-202ENST00000334348 HERC6Q8IVU3 1022 aa16.53■□□□□ 0.24
UPK3B-202ENST00000334348 FAM47BQ8NA70 645 aa16.53■□□□□ 0.24
UPK3B-202ENST00000334348 RDH11Q8TC12 318 aa16.53■□□□□ 0.24
UPK3B-202ENST00000334348 URGCPQ8TCY9 931 aa16.53■□□□□ 0.24
UPK3B-202ENST00000334348 SLCO4A1Q96BD0 722 aa16.53■□□□□ 0.24
UPK3B-202ENST00000334348 CYP3A43Q9HB55 503 aa16.53■□□□□ 0.24
UPK3B-202ENST00000334348 SLC38A7Q9NVC3 462 aa16.53■□□□□ 0.24
UPK3B-202ENST00000334348 DUS2Q9NX74 493 aaKnown RBP16.53■□□□□ 0.24
UPK3B-202ENST00000334348 HESX1Q9UBX0 185 aa16.53■□□□□ 0.24
UPK3B-202ENST00000334348 ZDHHC2Q9UIJ5 367 aa16.53■□□□□ 0.24
UPK3B-202ENST00000334348 TCRBV3S1A0A5B6 114 aa16.53■□□□□ 0.24
UPK3B-202ENST00000334348 ZNF189O75820 626 aaPredicted RBP16.53■□□□□ 0.24
UPK3B-202ENST00000334348 PRKCBP05771 671 aa16.53■□□□□ 0.24
UPK3B-202ENST00000334348 CYP3A5P20815 502 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms