RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 AS3MTQ9HBK9 375 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 FAM49BQ9NUQ9 324 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 SYBUQ9NX95 663 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 RNF11Q9Y3C5 154 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 CYP2C8P10632 490 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 SPRP35270 261 aaPredicted RBP13.98□□□□□ -0.17
SYNE3-201ENST00000334258 PPARGP37231 505 aaPredicted RBP13.98□□□□□ -0.17
SYNE3-201ENST00000334258 NUP107P57740 925 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 IRF9Q00978 393 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 PDAP1Q13442 181 aaKnown RBP13.98□□□□□ -0.17
SYNE3-201ENST00000334258 CYP2R1Q6VVX0 501 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 TICAM1Q8IUC6 712 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 TMEM126BQ8IUX1 230 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 CROCCP3Q8IVE0 287 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 LRRC71Q8N4P6 559 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 HTR3CQ8WXA8 447 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 LRTOMTQ8WZ04 291 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 ZNF669Q96BR6 464 aaPredicted RBP13.98□□□□□ -0.17
SYNE3-201ENST00000334258 TSNARE1Q96NA8 513 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 PAIP1Q9H074 479 aaKnown RBP13.98□□□□□ -0.17
SYNE3-201ENST00000334258 PCDHAC1Q9H158 963 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 NMRAL1Q9HBL8 299 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 CPSF3Q9UKF6 684 aaKnown RBP13.98□□□□□ -0.17
SYNE3-201ENST00000334258 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.98□□□□□ -0.17
SYNE3-201ENST00000334258 BCAS2O75934 225 aaPredicted RBP13.98□□□□□ -0.17
SYNE3-201ENST00000334258 GLRBP48167 497 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 RPL14P50914 215 aaKnown RBP13.98□□□□□ -0.17
SYNE3-201ENST00000334258 NAGLUP54802 743 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 SP2Q02086 613 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 SEMA5AQ13591 1074 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 GPR141Q7Z602 305 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 SETD3Q86TU7 594 aaPredicted RBP13.98□□□□□ -0.17
SYNE3-201ENST00000334258 THAP11Q96EK4 314 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 CERS2Q96G23 380 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 ACO2Q99798 780 aaKnown RBP13.98□□□□□ -0.17
SYNE3-201ENST00000334258 TASP1Q9H6P5 420 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 RPF1Q9H9Y2 349 aaKnown RBP13.98□□□□□ -0.17
SYNE3-201ENST00000334258 NRBP2Q9NSY0 501 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 TSPAN16Q9UKR8 245 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 DOLKQ9UPQ8 538 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 CDYLQ9Y232 598 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 PRSS51A0A1B0GVH4 220 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 MSCO60682 206 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 ALDH1A2O94788 518 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 SEC24DO94855 1032 aaPredicted RBP13.98□□□□□ -0.17
SYNE3-201ENST00000334258 VAPBO95292 243 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 CCDC130P13994 396 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 TFEBP19484 476 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 EFNA5P52803 228 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 ATXN1P54253 815 aaKnown RBP13.98□□□□□ -0.17
SYNE3-201ENST00000334258 GHRHRQ02643 423 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 EML3Q32P44 896 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 CCNYL1Q8N7R7 359 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 C12orf29Q8N999 325 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 DNAAF3Q8N9W5 541 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 ZNF670Q9BS34 389 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 INIPQ9NRY2 104 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 AFG3L2Q9Y4W6 797 aa13.98□□□□□ -0.17
SYNE3-201ENST00000334258 USP12O75317 370 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 RPL10P27635 214 aaKnown RBP13.97□□□□□ -0.17
SYNE3-201ENST00000334258 HOXD12P35452 270 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 DPP6P42658 865 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 PSMD7P51665 324 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 NDST2P52849 883 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 OXCT1P55809 520 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 ARL13AQ5H913 290 aaPredicted RBP13.97□□□□□ -0.17
SYNE3-201ENST00000334258 GRAMD4Q6IC98 578 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 ALDH16A1Q8IZ83 802 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 BBS5Q8N3I7 341 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 OSBPL6Q9BZF3 934 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 RGPD3A6NKT7 1758 aaPredicted RBP13.97□□□□□ -0.17
SYNE3-201ENST00000334258 RGPD4Q7Z3J3 1758 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 MATN2O00339 956 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 VDRP11473 427 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 ZNF26P17031 533 aaPredicted RBP13.97□□□□□ -0.17
SYNE3-201ENST00000334258 TFE3P19532 575 aaPredicted RBP13.97□□□□□ -0.17
SYNE3-201ENST00000334258 GRIA4P48058 902 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 GRTP1Q5TC63 336 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 FSTL4Q6MZW2 842 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 CYS1Q717R9 158 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 ZNF786Q8N393 782 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 FAM47BQ8NA70 645 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 AGAP2Q99490 1192 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 CPNE1Q99829 537 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 OSBPL11Q9BXB4 747 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 PFDN4Q9NQP4 134 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 TLK1Q9UKI8 766 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 PADI4Q9UM07 663 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 MFHAS1Q9Y4C4 1052 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 HES2Q9Y543 173 aa13.97□□□□□ -0.17
SYNE3-201ENST00000334258 A0A0A0MRY4 1105 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 SH3PXD2BA1X283 911 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 CCDC78A2IDD5 438 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 GIPC1O14908 333 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 CILPO75339 1184 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 C2P06681 752 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 NFICP08651 508 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 HOXD11P31277 338 aaPredicted RBP13.96□□□□□ -0.17
SYNE3-201ENST00000334258 GRM1Q13255 1194 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 OLIG2Q13516 323 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms