RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 TASP1Q9H6P5 420 aa24.06■■□□□ 1.44
TSKU-201ENST00000333090 VPS28Q9UK41 221 aa24.06■■□□□ 1.44
TSKU-201ENST00000333090 NME7Q9Y5B8 376 aa24.06■■□□□ 1.44
TSKU-201ENST00000333090 SYNJ2BP-COX16A0A087WUM0 186 aa24.06■■□□□ 1.44
TSKU-201ENST00000333090 BTBD19C9JJ37 291 aa24.06■■□□□ 1.44
TSKU-201ENST00000333090 EDNRBP24530 442 aa24.06■■□□□ 1.44
TSKU-201ENST00000333090 PHKA2P46019 1235 aa24.06■■□□□ 1.44
TSKU-201ENST00000333090 TP53INP2Q8IXH6 220 aa24.06■■□□□ 1.44
TSKU-201ENST00000333090 NLRP7Q8WX94 980 aa24.06■■□□□ 1.44
TSKU-201ENST00000333090 MFSD3Q96ES6 412 aa24.06■■□□□ 1.44
TSKU-201ENST00000333090 DNAAF2Q9NVR5 837 aaKnown RBP24.06■■□□□ 1.44
TSKU-201ENST00000333090 COX16Q9P0S2 106 aa24.06■■□□□ 1.44
TSKU-201ENST00000333090 GTF2IRD1Q9UHL9 959 aa24.06■■□□□ 1.44
TSKU-201ENST00000333090 HCRTO43612 131 aa24.05■■□□□ 1.44
TSKU-201ENST00000333090 H2AFYO75367 372 aaKnown RBP24.05■■□□□ 1.44
TSKU-201ENST00000333090 JUNP05412 331 aaKnown RBP24.05■■□□□ 1.44
TSKU-201ENST00000333090 ZSCAN18Q8TBC5 510 aaPredicted RBP24.05■■□□□ 1.44
TSKU-201ENST00000333090 AFG1LQ8WV93 481 aa24.05■■□□□ 1.44
TSKU-201ENST00000333090 DLG3Q92796 817 aa24.05■■□□□ 1.44
TSKU-201ENST00000333090 EME1Q96AY2 570 aa24.05■■□□□ 1.44
TSKU-201ENST00000333090 ZDHHC2Q9UIJ5 367 aa24.05■■□□□ 1.44
TSKU-201ENST00000333090 VANGL2Q9ULK5 521 aa24.05■■□□□ 1.44
TSKU-201ENST00000333090 DOCK1Q14185 1865 aa24.05■■□□□ 1.44
TSKU-201ENST00000333090 GOLGA8TH3BQL2 631 aa24.05■■□□□ 1.44
TSKU-201ENST00000333090 RNASEH2AO75792 299 aaKnown RBP24.05■■□□□ 1.44
TSKU-201ENST00000333090 BCAS2O75934 225 aaPredicted RBP24.05■■□□□ 1.44
TSKU-201ENST00000333090 ARF4P18085 180 aaPredicted RBP24.05■■□□□ 1.44
TSKU-201ENST00000333090 ADORA2BP29275 332 aa24.05■■□□□ 1.44
TSKU-201ENST00000333090 GLRBP48167 497 aa24.05■■□□□ 1.44
TSKU-201ENST00000333090 NAGLUP54802 743 aa24.05■■□□□ 1.44
TSKU-201ENST00000333090 AMHR2Q16671 573 aa24.05■■□□□ 1.44
TSKU-201ENST00000333090 SETD3Q86TU7 594 aaPredicted RBP24.05■■□□□ 1.44
TSKU-201ENST00000333090 KLRG1Q96E93 195 aa24.05■■□□□ 1.44
TSKU-201ENST00000333090 SPATA33Q96N06 139 aa24.05■■□□□ 1.44
TSKU-201ENST00000333090 PHF12Q96QT6 1004 aa24.05■■□□□ 1.44
TSKU-201ENST00000333090 NPAS2Q99743 824 aa24.05■■□□□ 1.44
TSKU-201ENST00000333090 CHCHD3Q9NX63 227 aaKnown RBP24.05■■□□□ 1.44
TSKU-201ENST00000333090 KLHL8Q9P2G9 620 aaPredicted RBP24.05■■□□□ 1.44
TSKU-201ENST00000333090 SLC39A10Q9ULF5 831 aa24.05■■□□□ 1.44
TSKU-201ENST00000333090 GRID2O43424 1007 aa24.04■■□□□ 1.44
TSKU-201ENST00000333090 TRMUO75648 421 aaKnown RBP24.04■■□□□ 1.44
TSKU-201ENST00000333090 PSMC3P17980 439 aa24.04■■□□□ 1.44
TSKU-201ENST00000333090 PLPPR4Q7Z2D5 763 aa24.04■■□□□ 1.44
TSKU-201ENST00000333090 OR6B3Q8NGW1 331 aa24.04■■□□□ 1.44
TSKU-201ENST00000333090 DRC3Q9H069 523 aa24.04■■□□□ 1.44
TSKU-201ENST00000333090 DPEP3Q9H4B8 488 aa24.04■■□□□ 1.44
TSKU-201ENST00000333090 EFCAB1Q9HAE3 211 aa24.04■■□□□ 1.44
TSKU-201ENST00000333090 CDYLQ9Y232 598 aa24.04■■□□□ 1.44
TSKU-201ENST00000333090 A0A0J9YVX5 310 aa24.04■■□□□ 1.44
TSKU-201ENST00000333090 PPEF2O14830 753 aa24.04■■□□□ 1.44
TSKU-201ENST00000333090 PTPN1P18031 435 aaKnown RBP24.04■■□□□ 1.44
TSKU-201ENST00000333090 GLUD2P49448 558 aa24.04■■□□□ 1.44
TSKU-201ENST00000333090 COG7P83436 770 aa24.04■■□□□ 1.44
TSKU-201ENST00000333090 MPP3Q13368 585 aa24.04■■□□□ 1.44
TSKU-201ENST00000333090 PTAR1Q7Z6K3 402 aaPredicted RBP24.04■■□□□ 1.44
TSKU-201ENST00000333090 SEMA6AQ9H2E6 1030 aa24.04■■□□□ 1.44
TSKU-201ENST00000333090 TIMMDC1Q9NPL8 285 aa24.04■■□□□ 1.44
TSKU-201ENST00000333090 BFARQ9NZS9 450 aa24.04■■□□□ 1.44
TSKU-201ENST00000333090 ZCWPW2A0A1B0GU75 182 aa24.04■■□□□ 1.44
TSKU-201ENST00000333090 CDH2P19022 906 aaPredicted RBP24.04■■□□□ 1.44
TSKU-201ENST00000333090 USP41Q3LFD5 358 aa24.04■■□□□ 1.44
TSKU-201ENST00000333090 TMEM102Q8N9M5 508 aaPredicted RBP24.04■■□□□ 1.44
TSKU-201ENST00000333090 GAB3Q8WWW8 586 aa24.04■■□□□ 1.44
TSKU-201ENST00000333090 ZNF112Q9UJU3 913 aa24.04■■□□□ 1.44
TSKU-201ENST00000333090 IL23RQ5VWK5 629 aa24.03■■□□□ 1.44
TSKU-201ENST00000333090 LIPMQ5VYY2 423 aa24.03■■□□□ 1.44
TSKU-201ENST00000333090 CPSF7Q8N684 471 aaKnown RBP24.03■■□□□ 1.44
TSKU-201ENST00000333090 RNF139Q8WU17 664 aa24.03■■□□□ 1.44
TSKU-201ENST00000333090 ATP6V1E2Q96A05 226 aa24.03■■□□□ 1.44
TSKU-201ENST00000333090 VPS39Q96JC1 886 aa24.03■■□□□ 1.44
TSKU-201ENST00000333090 SCYL1Q96KG9 808 aa24.03■■□□□ 1.44
TSKU-201ENST00000333090 ZBTB26Q9HCK0 441 aa24.03■■□□□ 1.44
TSKU-201ENST00000333090 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.03■■□□□ 1.44
TSKU-201ENST00000333090 ADA2Q9NZK5 511 aa24.03■■□□□ 1.44
TSKU-201ENST00000333090 ACOT8O14734 319 aa24.03■■□□□ 1.44
TSKU-201ENST00000333090 VAPBO95292 243 aa24.03■■□□□ 1.44
TSKU-201ENST00000333090 TMEM135Q86UB9 458 aa24.03■■□□□ 1.44
TSKU-201ENST00000333090 FAM149B1Q96BN6 582 aa24.03■■□□□ 1.44
TSKU-201ENST00000333090 C20orf96Q9NUD7 363 aaPredicted RBP24.03■■□□□ 1.44
TSKU-201ENST00000333090 FZD10Q9ULW2 581 aa24.03■■□□□ 1.44
TSKU-201ENST00000333090 CEPT1Q9Y6K0 416 aa24.03■■□□□ 1.44
TSKU-201ENST00000333090 NELFEP18615 380 aaKnown RBP24.02■■□□□ 1.44
TSKU-201ENST00000333090 PRKAA1Q13131 559 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 PTK2BQ14289 1009 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 DNAH12Q6ZR08 3092 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 NDRG1Q92597 394 aaKnown RBP24.02■■□□□ 1.44
TSKU-201ENST00000333090 COPS5Q92905 334 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 APOL2Q9BQE5 337 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 CXCL16Q9H2A7 254 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 IARS2Q9NSE4 1012 aaKnown RBP24.02■■□□□ 1.44
TSKU-201ENST00000333090 IGSF9Q9P2J2 1179 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 THEGQ9P2T0 379 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 CIDEBQ9UHD4 219 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 SCN1AP35498 2009 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 PHGDHO43175 533 aaKnown RBP24.02■■□□□ 1.44
TSKU-201ENST00000333090 TIMM44O43615 452 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 CSPG5O95196 566 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 PGK2P07205 417 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 SULT1E1P49888 294 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 GALK1P51570 392 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms